Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0010 ATGGAGTCATTAACAGAGGAAAGGATTGAGATAAGAGATGATCACAAACAGCCGTTACTCATCAGAAGCAGAATTAATAACTCTTCTCAACTCGCCATCGTTGGAGCCAATATTTGCCCTATTCAGAGTCTTGATTACGAGTTAATTGAGAATGATCTATTGAAACAGGACTGGAGGTCAAGAACAAAGGTTGAGATATACCAATATGTTGTTCTGAAGTGGACCCTTGCACTTCTTATTGGTTTAATTACAGGACTTGTTGGGTTCTTTAATAACCTTGGAGTTGAGAATATTGCTGGTTTCAAACTTCTACTCACCAACAATCTCATGCTCAAGCAAAAGTACCATGAGGCATTTGCAGTGTACGTTGGTTGTAACATGATTTTAGGGGTTGGTGCGGCAGCCCTGTGTGCTTACATTGCTCCTGCAGCTGCTGGCTCTGGCATACCAGAGGTGAAGGCATACCTCAACGGCATTGATGCACATTCTATATTGGCCCCATCTACCCTCTTTGTCAAGATATTTGGTTCGATTTTAGGAGTTGCTGCTGGTTTCATTGTGGGGAAAGAAGGACCCATGGTTCATACAGGTGCTTGCATTGCTAATTTACTCGGACAAGGTGGTTCGCGTAAATATCGACTCACCTGGAAATGGCTCAGATACTTCAAAAATGATAGAGATAGGAGGGATTTGATCACGTGCGGTGCAGCTGCTGGTGTTGCCGCTGCCTTCCGTGCCCCCGTTGGTGGTGTTCTGTTCGCACTCGAAGAGGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGCACATTCTTTACCACTGCAGTAGTAGCAGTTGTTTTGAGGAGTCTTATGCAGTTCTGTCATCAGGGAGGAGGCAGATGTGGTCTGTTTGGAGAAGGGGGACTCATCATGTTTGATGTTAATTCTGCAAAGCCTGCCTACACCACACCTGACCTCCTCGCAGTTATATTTCTTGGAGTCATTGGAGGTCTCATGGGAAGCTTTTACAATTATCTTGTCGATAAAGTCCTTCGCACTTACGGCGCTATAAATGAGAGAGGTCCAATATTCAAGATTCTGCTGGTGATGATTATCTCGTTTGTAACCTCCTGTATTCGATTTGGGCTTCCATTGCTATCAAAGTGTGTGCCATGTCCAGGGGAGTGTCCCAGCTCCCCAACCGGAGGCTTCTCAATACACTACGACAATTTTCAGTGTCCACCAAACCACTACAATGATCTCAGCTCTCTATTTTTCACTACCAACGACGATGCCATCCGCAGCCTATTCAATGATGGCTCCGCCTCTGCTAACACCGGATTTCAGCTATCAAGTCTCATAATTTTCTTCGTGGCGATATACTTGCTTGGAATTGTGACATACGGTGTTGCCATTCCCTCTGGACTCTTCATTCCCGTCATACTTGCTGGAGCTTCTTACGGGCGTCTTATAGGGACTGTGATGGCTCCATTCACAGCTCTTGATACGGGTTTGTTTGCTCTCCTTGGAGCCGCATCTTTCCTTGGTGGCACGATGAGAATGACAGTTTCTCTATGTGTCATACTTCTTGAACTCACTAATAACTTGTTGATGCTACCATTGGTCATGTTGGTTCTCCTCATTTCTAAGACAGTGGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTGGCGTTGAAGGGACTACCTTATATGGAAGCACATGCAGAGCCATACATGAGGAATTTAGTTGCAGGGGATGTTGTTTCTGGTCCACTGTTTTCTTTTTGTGGGATCGAAAAAGTGGGGAATATATTGCACGCTTTGAAAGTGACAGAACATCACGGATTTCCAGTAGTTGATGAGCCTCCTTTGACGGATGCTCCCGAGTTGTGTGGGTTGGTGTTGAGGTCTCATCTTTTGGTGCTTCTCAAGCACAAGACATTGTTCACTAGGGAGAGGGTGATGACAGGGTCTACTATTGTGAACAAGGTTAAGGCAAGGGATTTTGCAAAACCAGGTTTGGGAAGAGGGATAAGGGTGGAGGATTTGGACATTTCACAAGAGGAGATGGAAATGTATGTTGATCTTCATCCAATCACAAATACTTCTCCATATACTGTTGTTGAAACAATGTCTCTTGCAAAAGCTGCTCTTCTGTTTCGGGAGCTTGGACTCAGGCATTTGCTAGTTGTGCCTAAGAAACCAGGAAGGCCTCCAATTGTTGGGATACTGACAAGGCATGATTTCATGCACGACTATATCTTGGGCCTATTCCCAAACTTGAATCCCCACAAGTAG 2286 0.4497 MESLTEERIEIRDDHKQPLLIRSRINNSSQLAIVGANICPIQSLDYELIENDLLKQDWRSRTKVEIYQYVVLKWTLALLIGLITGLVGFFNNLGVENIAGFKLLLTNNLMLKQKYHEAFAVYVGCNMILGVGAAALCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSILGVAAGFIVGKEGPMVHTGACIANLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSLMQFCHQGGGRCGLFGEGGLIMFDVNSAKPAYTTPDLLAVIFLGVIGGLMGSFYNYLVDKVLRTYGAINERGPIFKILLVMIISFVTSCIRFGLPLLSKCVPCPGECPSSPTGGFSIHYDNFQCPPNHYNDLSSLFFTTNDDAIRSLFNDGSASANTGFQLSSLIIFFVAIYLLGIVTYGVAIPSGLFIPVILAGASYGRLIGTVMAPFTALDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFNKGVYDQIVALKGLPYMEAHAEPYMRNLVAGDVVSGPLFSFCGIEKVGNILHALKVTEHHGFPVVDEPPLTDAPELCGLVLRSHLLVLLKHKTLFTRERVMTGSTIVNKVKARDFAKPGLGRGIRVEDLDISQEEMEMYVDLHPITNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKKPGRPPIVGILTRHDFMHDYILGLFPNLNPHK* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0010 761 CDD ClC_6_like 42 567 - -
Mtr2g0010 761 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 10 761 - -
Mtr2g0010 761 Pfam Voltage gated chloride channel 130 548 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 Gene3D Clc chloride channel 65 567 - -
Mtr2g0010 761 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 10 761 - -
Mtr2g0010 761 Gene3D - 568 748 IPR046342 -
Mtr2g0010 761 SUPERFAMILY Clc chloride channel 51 569 IPR014743 -
Mtr2g0010 761 SUPERFAMILY CBS-domain pair 571 747 IPR046342 -
Mtr2g0010 761 Pfam CBS domain 697 746 IPR000644 -
Mtr2g0010 761 PRINTS Plant CLC chloride channel signature 47 55 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr2g0010 761 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr2g0010 761 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr2g0010 761 PRINTS Plant CLC chloride channel signature 415 431 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr2g0010 761 ProSiteProfiles CBS domain profile. 695 756 IPR000644 -
Mtr2g0010 761 CDD CBS_pair_voltage-gated_CLC_euk_bac 570 748 - -
Mtr2g0010 761 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 PRINTS Chloride channel signature 466 486 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 PRINTS Chloride channel signature 498 514 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 PRINTS Chloride channel signature 516 535 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr2g0010 761 PRINTS Chloride channel signature 554 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0010 Mtr-Chr2 159694 164800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0010 16 761 Ion Channels AT5G49890 75.766 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0010 K05016 - jre:108988922 1113.98