Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0007 ATGTCTGAAGAGGCGGCGGGTGGATCCATGTTGGTAGTTTATGATGACGATGACGTTGATGTTGATGTTGACGATGATCCTTCTGACCAACATTTGGGAGGAGGAGGAGGAGGAGGAGGATGCGATACAAGCAGCACAGAAGACTCCCCTTCTCATCAAACCACACTCCATTTGGTGGACCCAACAACAACAACTCATCATCACATTCCATACATCGGTCAAATGTTTCCCACGCACGATGCTGCTTATGACTTCTATACTCATTTTGCCAAGACCTGCGGCTTCTCTATTAGACGTCATCGTACTGAAGGAAAAGACGGTGTTGGCAAAGGACTTACTAGACGCTACTTTGTTTGTCACCGTGCTGGCAACACTCCTGCCAAATCATCAACCCAAACTAAACCTCAACGAAATAGAAAATCTTCCAGATGTGGTTGTCAGGCTTATATGCGCATAAGCAAAACCACTGAATTTGGGCCTCCAGAATGGCGCGTCACTGGTTTTGCCAACCACCATAATCATGAACTTTTGGAACCAAACCAAGTTCGATTCCTTCCTGCATACAGAACTATATCAGATGCTGACAAAAATCGAATCCTTATGTTTGCCAAAACAGGGATTTCTGTTCATCAAATGATGAGACTTATGGAGCTTGAGAAGTGCGTCGAACCTGGATATTTGCCTTTTACTGAAAAGGACGTAAGGAATTTACTCCAGTCATTTAGAAAATTAGATCCAGAAGAAGAAACCCTAGATTTGTTAAGAATGTGCAGAAATATTAAGGACAAAGATCCTAATTTTAAATTTGAGTACACACTTGATGCAAACAACCGTTTAGAAAATATTGCCTGGTCCTATGCCTCATCCATCCAATTGTATGATATCTTCGGTGATGCTGTGGTGTTTGATACAACACATCGTCTCACTGCATTTGACATGCCGCTGGGGTTATGGGTTGGGATAAATAATTATGGAATGCCCTGCTTCTTTGGCTGTGTGCTACTGCGAGATGAAACTGTCCGGTCATTTTCCTGGGCCATAAAGGCTTTCTTAGGTTTTATGAATGGGAAGGCTCCACAGACTATATTAACTGATCAAAACATTTGTCTCAAAGAAGCACTATCTGCAGAAATGCCGATGACAAAACATGCTTTCTGCATATGGATGATAGTAGCAAAGTTTCCATCTTGGTTCAATGCCGTTCTAGGTGAACGCTACAATGACTGGAAGGCCGAGTTTTATAGACTTTATAATCTTGAATCAGTTGACGACTTTGAACTAGGCTGGAGGGAGATGGTCTGTTCTTTTGGGCTGCATTCCAATCGACACATTCTTAATTTATATAGCTCGCGCTCACTTTGGGCATTGCCATATTTAAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATCAACGCCTTCATTCAACGGTTTCTAAGTGCACAGACACGGCTTGCTCACTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACTGGTGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTCGCCTTAAAACAGGAGCCCCCATGGAATCGCACGCTGCTACGGTCCTCACTCCTTTTGCCTTTTCGAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCATCTTTTTCAGTTGAAGATGGTTTTCTTGTGAGACATCACACAAAAGTTGAAGGAGGTCGCAGAGTTTACTGGTCCCCTCATGAAGGAATTATAAGCTGCAGCTGTCACCAGTTTGAATTTTCTGGAATTTTGTGTAGGCACTCTCTGAGAGTTCTTTCAACAGGAAATTGCTTTCAAATCCCAGATGCATATCTTCCCATCCGATGGCGTCGTATCAGTGTGCCTTCTTCTAAGATTCTTCAAAATGCACCTAGCGATCATGCCGAAAGAGTTAAGCTATTCCAAAATATGGTTTCATCTCTAATTACAGAATCTGCTAAGTCTAAAGAACGATTAGATATTGCAACAGAACAAGTTTCCATTCTTCTGTCTCGCATAAGAGAGCAACCAATTTCATTACAATGTGCCAGAGATACTTCTACCATTAGGAATCTATGA 2103 0.4218 MSEEAAGGSMLVVYDDDDVDVDVDDDPSDQHLGGGGGGGGCDTSSTEDSPSHQTTLHLVDPTTTTHHHIPYIGQMFPTHDAAYDFYTHFAKTCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPAKSSTQTKPQRNRKSSRCGCQAYMRISKTTEFGPPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDADKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEETLDLLRMCRNIKDKDPNFKFEYTLDANNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGLWVGINNYGMPCFFGCVLLRDETVRSFSWAIKAFLGFMNGKAPQTILTDQNICLKEALSAEMPMTKHAFCIWMIVAKFPSWFNAVLGERYNDWKAEFYRLYNLESVDDFELGWREMVCSFGLHSNRHILNLYSSRSLWALPYLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVRLKTGAPMESHAATVLTPFAFSKLQEQLVLAAHYASFSVEDGFLVRHHTKVEGGRRVYWSPHEGIISCSCHQFEFSGILCRHSLRVLSTGNCFQIPDAYLPIRWRRISVPSSKILQNAPSDHAERVKLFQNMVSSLITESAKSKERLDIATEQVSILLSRIREQPISLQCARDTSTIRNL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0007 700 MobiDBLite consensus disorder prediction 1 56 - -
Mtr2g0007 700 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 691 IPR031052 GO:0006355
Mtr2g0007 700 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 64 691 - -
Mtr2g0007 700 MobiDBLite consensus disorder prediction 123 142 - -
Mtr2g0007 700 Pfam MULE transposase domain 300 392 IPR018289 -
Mtr2g0007 700 Pfam SWIM zinc finger 582 609 IPR007527 GO:0008270
Mtr2g0007 700 Pfam FAR1 DNA-binding domain 84 177 IPR004330 -
Mtr2g0007 700 ProSiteProfiles Zinc finger SWIM-type profile. 575 611 IPR007527 GO:0008270
Mtr2g0007 700 SMART 26again6 586 613 IPR006564 GO:0008270
Mtr2g0007 700 MobiDBLite consensus disorder prediction 42 56 - -
Mtr2g0007 700 MobiDBLite consensus disorder prediction 124 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0007 Mtr-Chr2 132036 135568 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g0007 MULE 4.3e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0007 - - gmx:100810717 1229.93