Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4505 ATGGGTTGTTTTTCGTGTTTCGATTCCAAGGAGGATGAGAAGTTGAATCCTAATCAGCATCAACATCAGGAAACCCATCATCATCATCACGATCATAATAATATTTCTAGATTGCCCTCTTCCGGACCCTCTGGAGTGGAGAAGCTGCGGTCAACAAGTAATGGATCTTCCAAAAGGGAATTGCAATTGCAATTGCAATTACCTGCTGCTCTCAAAGACGGACCACCTGGCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCCGCTGCTACCAAAAACTTCAGGCCTCAGTCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGCCTCGAAACCACGGGTCAGGCTGTTGCTGTTAAACAGTTGGACAGAAACGGTCTCCAGGGTAATCGGGAGTTCCTTGTCGAGGTTCTCATGCTCAGTCTTCTACACAGCCCTAACCTTGTCAGTCTCATTGGATACTGTGCCGATGGCGACCAACGCCTCCTAGTTTATGAATTTATGCCATTGGGATCGTTGGAAGACCATCTTCACGATCTCCCTGCGGATAAGGAACCATTAGATTGGAACACTAGAATGAAAATAGCTGCTGGTGCCGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTAATTTACAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCTGACTTTGGTTTGGCTAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAATATGCTATGACTGGACAACTAACTGTAAAATCAGATGTATATAGTTTTGGTGTAGTCTTTTTGGAGCTAATTACTGGCCGTAAAGCCATTGACAGCACCCGCCCCCATGGAGAACAAAACCTTGTCACATGGGCACGGCCTTTGTTCAATGACCGTAGGAAGTTTTCAAAGTTGGCAGATCCACGGTTGCAGGGGCGGTATCCCATGCGAGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAGCAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTGACAGCCCTCTCTTATCTTGCCAACCAGGCACATGATACCAACAATGCTAGTATTGGTAATAATAAGGGAACTGGTGATGAGAAAAGGAATAGAGATGATAAAGGTGGAAGAATATTAAAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTAAGAGAAAAAAGACGACAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCCTAG 1422 0.4571 MGCFSCFDSKEDEKLNPNQHQHQETHHHHHDHNNISRLPSSGPSGVEKLRSTSNGSSKRELQLQLQLPAALKDGPPGQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHSPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPADKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAHDTNNASIGNNKGTGDEKRNRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLREKRRQSVQGSFDASNA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4505 473 Pfam Protein kinase domain 99 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4505 473 Gene3D Transferase(Phosphotransferase) domain 1 173 396 - -
Mtr1g4505 473 MobiDBLite consensus disorder prediction 11 35 - -
Mtr1g4505 473 PANTHER OS07G0668900 PROTEIN 1 468 - -
Mtr1g4505 473 MobiDBLite consensus disorder prediction 380 439 - -
Mtr1g4505 473 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 468 - -
Mtr1g4505 473 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Mtr1g4505 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mtr1g4505 473 MobiDBLite consensus disorder prediction 36 61 - -
Mtr1g4505 473 MobiDBLite consensus disorder prediction 11 61 - -
Mtr1g4505 473 Gene3D Phosphorylase Kinase; domain 1 80 172 - -
Mtr1g4505 473 SUPERFAMILY Protein kinase-like (PK-like) 81 368 IPR011009 -
Mtr1g4505 473 CDD STKc_IRAK 102 370 - -
Mtr1g4505 473 MobiDBLite consensus disorder prediction 391 439 - -
Mtr1g4505 473 ProSiteProfiles Protein kinase domain profile. 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4505 Mtr-Chr1 56665424 56672945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4505 1 461 Glycoside Hydrolase AT3G07070 54.664 2.02e-164 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr1g4505 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4505 K13430 - gmx:100777987 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4505 1 56665424 56672945 Mtr1g2244 1 32797393 32809420 ECH
Mtr1g4505 1 56665424 56672945 Mtr1g2245 1 32816877 32822227 ECH
Mtr1g4505 1 56665424 56672945 Mtr1g4505 1 56665424 56672945 ECH