Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4490 ATGGCTCGTAGAGGAGAAGAAGAACAACAAGTGTTTCGTCGCGTTAAGAGAGAACGCCTCAACGCCGCCGCCGCCACGGAGGAGAAGGATGAAGAAGAAGAAGAAGAGGAGAATCAGGACTCCAGTATTCGCAGAATCATCCGCTCCGAGTTCTTCAAACTCAAGTCTCTTATCAATGAGGAAAAAGATGATTTGATGAACGGTGATTCAGAGAAGTTCGATTCAATCCTTCACGAGTTCGATAAGTTACATGAGCAAGTGAAGAAACCTCGAGAACAGGTTGCTGACGCTGAAGCACTTCTAGATCTGACACGCACTCTTGTTGGATCCGTTAAATCTCTTGTCAACGAAGGTGTTACTCCTTCTCAGTTTGTTTCATCTCTTCTCAAACACTATGCTCACCCACCCAACAACGCCGCTTCCATTGACTGGCATAAACTCGGCATTTCTGTTTCCCCCATTTTCCTCACTGTTCATGGTTCCTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAACGCAAAACCATTGTTTCTAGAAAGAGAAATCCTCGCTCTACTACAACTGCTAGACCTCAACAGCTCCAAGATACTGAGGGAGAGGAAAAAACTGATACTGACAAAAACATGTCAACCATGTTCAACATATTAAGGGAAAACAAAAAGGTCCAACTTGAACACCTCATTTTGAACAGATTTTCTTTTGCTCAGACAGTTGAAAACCTGTTTGCCCTCTCATTCTTGGTCAAAGATGGTCGCGCTGAAATCAGTATGGATGACAAACGTTCACACTATGTTTCACCAAAGAATGCTCCTGCTGCCAACTCTATAATGTCAAAAGAAGTTTCTTACACTCATTTTGTCTTCAGATATGATTACAAAGATTGGAAGATAATGAAGGATATTGTGCCTGATGGCAAAGAGCTAATGCCACATAGGATTCAGTACAGTACTGCGGCTGATCCATCACAGGAAGAGATGGGTGGTGACAGTTCCACACAAGCTTTGGCTGTGACTCCTATCAGGAAGATATCTAGGAACCGAGGGCGTGTTCTGCAGGAGGAGAGTGTTGTGGAAGAATCTCCTGAATGTGATGATGAAAATGCTTCTAGAGCTGCTGCAATCCGAAGGTGTAAGCGTAAACTTCATTAG 1155 0.4364 MARRGEEEQQVFRRVKRERLNAAAATEEKDEEEEEEENQDSSIRRIIRSEFFKLKSLINEEKDDLMNGDSEKFDSILHEFDKLHEQVKKPREQVADAEALLDLTRTLVGSVKSLVNEGVTPSQFVSSLLKHYAHPPNNAASIDWHKLGISVSPIFLTVHGSSTMLGPMENQLKQRKTIVSRKRNPRSTTTARPQQLQDTEGEEKTDTDKNMSTMFNILRENKKVQLEHLILNRFSFAQTVENLFALSFLVKDGRAEISMDDKRSHYVSPKNAPAANSIMSKEVSYTHFVFRYDYKDWKIMKDIVPDGKELMPHRIQYSTAADPSQEEMGGDSSTQALAVTPIRKISRNRGRVLQEESVVEESPECDDENASRAAAIRRCKRKLH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4490 384 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 22 366 - -
Mtr1g4490 384 MobiDBLite consensus disorder prediction 319 341 - -
Mtr1g4490 384 MobiDBLite consensus disorder prediction 176 208 - -
Mtr1g4490 384 MobiDBLite consensus disorder prediction 319 372 - -
Mtr1g4490 384 MobiDBLite consensus disorder prediction 15 41 - -
Mtr1g4490 384 PANTHER UNCHARACTERIZED 22 366 IPR027786 GO:0005634|GO:0006281|GO:0030915
Mtr1g4490 384 Coils Coil 15 42 - -
Mtr1g4490 384 Pfam Nse4 C-terminal 224 304 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4490 Mtr-Chr1 56503056 56506195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4490 3 383 Non-SMC Element family AT1G51130 47.826 5.99e-119 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4490 K22825 - gmx:100792117 511.916