Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4468 ATGAATATTCATTGTCATCATTTTGGAATTATGGCTATATCATCATCATCATCATCATTGGTAACCAATAATAATAGCAGCTTGTTCTCAGTCTCAGCAAGGCCACAGATTTTGGTTACTTCTTCTCTTCCTTTCATGTCCACAACTTCCATCCATTTCCATTATTCACCTCATAATAAGCTTCACCTCCGGCAGCGGTTTAATTCTGTTACAAAATCATGCGATGTTCGCGTGACAACATTAGCCATATCAACCGGTGTGCAACAAGTTCTTCCACCACCCCTTACTTCCACTTCACCTCCACCTTCCTTATTTGATGGAACTACCAGGTTGTATATCTCCTACAAATGCCCCTATGCCCAGCGTGTATGGATTACCCGTAACACTAAGGGATTGCAGGACAAGATACAGTTGGTTCCCATTGATCTACAAGACAGACCTTCTTGGTACAAGGACAAAGTCCACCCAACCAACAAGGTTCCATCTCTTGAACACAATAATGAAGTTAGAGGAGAGAGTCTGGATCTGATTAAATATATTGACACTCATTTTGAAGGACCCTCCCTTTACCCTAGTGGTCATGATGACAAGGAGTTTGCTGAAGAGTTGCTATCTTACACAGATACATTTTACAAGACAGTTGTTTCTTATTTTAAAGGAGATGTAACTGAGGCTGGCACTGCATTTGATTACCTTGAGACTGTTCTCTCCAAATATGATCACGGACCTTTCTTCCTTGGCCAATTCAGTCTGGTGGATATAGCATATGCTCCTTTCATGGAAAGATTTCAACCGTTTTTAATGGATGTGAAAAATTATGACATTACAGTGGGCAGGCCTAGACTGACAGCATGGATTGAGGGAATAAACAACATTGAAGGCTACAAAATAACACGTTCTGATCCTAAGGAGTTAGTTGAAAGCTACAAGAAGCGATTCCTGGCAAATCCATGA 954 0.4078 MNIHCHHFGIMAISSSSSSLVTNNNSSLFSVSARPQILVTSSLPFMSTTSIHFHYSPHNKLHLRQRFNSVTKSCDVRVTTLAISTGVQQVLPPPLTSTSPPPSLFDGTTRLYISYKCPYAQRVWITRNTKGLQDKIQLVPIDLQDRPSWYKDKVHPTNKVPSLEHNNEVRGESLDLIKYIDTHFEGPSLYPSGHDDKEFAEELLSYTDTFYKTVVSYFKGDVTEAGTAFDYLETVLSKYDHGPFFLGQFSLVDIAYAPFMERFQPFLMDVKNYDITVGRPRLTAWIEGINNIEGYKITRSDPKELVESYKKRFLANP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4468 317 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 107 188 IPR004045 -
Mtr1g4468 317 Pfam Glutathione S-transferase, N-terminal domain 111 187 IPR004045 -
Mtr1g4468 317 Gene3D - 186 316 - -
Mtr1g4468 317 PANTHER GLUTATHIONE S-TRANSFERASE L1 44 314 IPR044629 GO:0004364
Mtr1g4468 317 SUPERFAMILY GST C-terminal domain-like 184 313 IPR036282 -
Mtr1g4468 317 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 44 314 - -
Mtr1g4468 317 CDD GST_C_Lambda 197 310 - -
Mtr1g4468 317 Pfam Glutathione S-transferase, C-terminal domain 222 287 - -
Mtr1g4468 317 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 166 313 IPR010987 -
Mtr1g4468 317 SUPERFAMILY Thioredoxin-like 101 189 IPR036249 -
Mtr1g4468 317 Gene3D Glutaredoxin 82 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4468 Mtr-Chr1 56261272 56264093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4468 66 315 Glutathione S-transferase Gene Family AT3G55040 60.159 1.82e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4468 K00799 - ming:122093307 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4468 1 56261272 56264093 Mtr1g2248 1 32846734 32848503 ECH
Mtr1g4468 1 56261272 56264093 Mtr1g4468 1 56261272 56264093 ECH