Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4467 ATGGTATCTGCTACAATTAGGCGAATTGTGTCACCCTGTTGGAGGCCATCTATTGAGGGTGAAAATTCTGGTGATGCAAGTGGACGTTCCGATGGTTTATTATGGTATAAAGATTTTGGAAGACATTCAGATGGTGATTTCTCAATGGCTGTTGTTCAAGCAAACAATTTGTTGGAGGATCAATGTCAAGTTGAATCAGGACCCATGAGCTCAATTGAAGGAAGTCCTCGAGGTACTTTTGTTGGTGTATATGACGGGCATGGAGGTCCAGAAACTGCCCGCTTTGTCAATGGACGTCTATTTAAACATATCAAGAAGTTCACTTCAGAAAATCAGGGAATGTCAGCTGATGTTATCACTAAAGCATTTTTGGCTACAGAAGAAGAATTTCTTGCTCTTGTAAAGAAGCAGTGGCAACACAAACCACAGATAGCGTCAGTTGGATCTTGCTGTTTGGTAGGTGTAATATATAGTGGGGAGCTCTATATTGCAAATGCAGGAGACTCACGAGCAGTGTTAGGTAGACTGGACGAGGCTACAAAAGAGATTAAAGCGGTTCAACTATCCTATGAGCACAATGCTAGCCTGGAATCTGTAAGAGAGGAGCTACGCTCGTTGCATCCCAATGATCCACAGATTGTAGTGATGAAGCACACGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGCGACGCTTATCTAAAGAAGAAAGAGTTTAACCAAGCACCACTGTTAACAAAATTTCGGCTCCCAGAACCCTTTGAAACGCCTATCCTCAAAGCTGAACCAACAATACAAGTACAGAAACTACAACCTTGTGATCAATTTCTTATATTTGCATCAGATGGATTATGGGAGCACTTGAGCAATCAAGAAGCTGTTGACATTGTCCAGAGCTGTCCACGCAATGGAGTAGCGAAGAAACTGATCAAAGCAGCGCTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATATTCAGACTTGAAAAAGATCGACCGTGGGGTACGAAGACATTTCCATGATGATATAACGGTTATAGTTGTGTATCTTGATTCGCATAATCCACGTGCTCCGGCCGTTTCAATTAAAGGAGGTGGTGATTTTGGCATTGGTATTGTAAATGGCTAA 1140 0.4237 MVSATIRRIVSPCWRPSIEGENSGDASGRSDGLLWYKDFGRHSDGDFSMAVVQANNLLEDQCQVESGPMSSIEGSPRGTFVGVYDGHGGPETARFVNGRLFKHIKKFTSENQGMSADVITKAFLATEEEFLALVKKQWQHKPQIASVGSCCLVGVIYSGELYIANAGDSRAVLGRLDEATKEIKAVQLSYEHNASLESVREELRSLHPNDPQIVVMKHTVWRVKGLIQISRSIGDAYLKKKEFNQAPLLTKFRLPEPFETPILKAEPTIQVQKLQPCDQFLIFASDGLWEHLSNQEAVDIVQSCPRNGVAKKLIKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSHNPRAPAVSIKGGGDFGIGIVNG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4467 379 PANTHER ALPHABET, ISOFORM E-RELATED 8 371 - -
Mtr1g4467 379 SMART PP2C_4 40 352 IPR001932 -
Mtr1g4467 379 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Mtr1g4467 379 CDD PP2Cc 47 354 IPR001932 -
Mtr1g4467 379 SMART PP2C_SIG_2 59 354 IPR001932 -
Mtr1g4467 379 Gene3D - 40 360 IPR036457 -
Mtr1g4467 379 Pfam Protein phosphatase 2C 67 324 IPR001932 -
Mtr1g4467 379 ProSiteProfiles PPM-type phosphatase domain profile. 46 354 IPR001932 -
Mtr1g4467 379 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Mtr1g4467 379 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4467 Mtr-Chr1 56256688 56259997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4467 3 373 PP2C-type Phosphatase Gene Family AT3G12620 75.132 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4467 K01102 - gmx:100785413 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4467 1 56256688 56259997 Mtr1g4467 1 56256688 56259997 ECH