Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4466 ATGAGAGGGGCTGATGTCAATATATTTGTCACTGGCAAGAACAATACGGTACGTGCTAAGAGGTTAATTGGTAAGAAGTTTAGTGATCCTGTTGTTCAAGATGATATATTGTTATGGTCATTCAAGGTTTCCCAATGTACAAAGGACAAGGAGTTGTGCAAGGGCATTAATCCTGATGAGGTTGTAGCTTATGGCGCAGCTGTTCAGGCTGCATTGTTGAGTGAAGGCATTCAGAATGTTCCAAATGATAGGAAATTTAATGAAACACTTTGCATCCCTGTCAATAAAACAAAAGCCTATATAACAACCAAAGATAACCAAACCATTTCCTCTATTCATGTTTATGGGGGTGAGAGAACAAGAGCCAGTGATAACAATTTGCTCGGTTCTTTTATTTTGTCTGGTATTCCCCCAGCTCCTCGCGGCTCCCCTTTTTCAAATGTTTGTTTTTCTATTGATGAAAATGGTATTTTGACAGTTTCCGCTAAGAATATTGCTTCTGGCAGTTCAAATAAGATTACAATTACCAATCACAAAGAAAGGTTGTCAAGTGAGGACATTAAAAAATTAATTCAAGAAGCTGAGAATTACTGTATTGAAGACAAGAAATTCCTAAGGAAGGCTAAACCATGGAATGCATTGGATGACTACATTTACAAAATCAGAAATGCTTTAAAGAAAGAGGATATTAATTTGAAGCTCTCCTCAGAAGAAATTGAGAAGATCGAATCTGCAATTGCAGTGGCCACGAATTTGGTTGATCAGAAAAACCAGCAAGTTGAAATAGATGTTCTGGAAGATCATGTAAAGGAACTTCAGAGTTGGATGAAACAGATTATAGCTAAGACTACTTAG 855 0.3708 MRGADVNIFVTGKNNTVRAKRLIGKKFSDPVVQDDILLWSFKVSQCTKDKELCKGINPDEVVAYGAAVQAALLSEGIQNVPNDRKFNETLCIPVNKTKAYITTKDNQTISSIHVYGGERTRASDNNLLGSFILSGIPPAPRGSPFSNVCFSIDENGILTVSAKNIASGSSNKITITNHKERLSSEDIKKLIQEAENYCIEDKKFLRKAKPWNALDDYIYKIRNALKKEDINLKLSSEEIEKIESAIAVATNLVDQKNQQVEIDVLEDHVKELQSWMKQIIAKTT* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4466 284 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 86 210 IPR029047 -
Mtr1g4466 284 Gene3D - 18 63 - -
Mtr1g4466 284 Gene3D - 211 284 IPR029048 -
Mtr1g4466 284 Coils Coil 239 259 - -
Mtr1g4466 284 PANTHER HEAT SHOCK PROTEIN 70KDA 48 80 IPR013126 GO:0005524|GO:0140662
Mtr1g4466 284 PANTHER HEAT SHOCK PROTEIN 70KDA 12 50 IPR013126 GO:0005524|GO:0140662
Mtr1g4466 284 PANTHER HEAT SHOCK PROTEIN 70KDA 90 283 IPR013126 GO:0005524|GO:0140662
Mtr1g4466 284 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 91 212 IPR029047 -
Mtr1g4466 284 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 212 283 IPR029048 -
Mtr1g4466 284 PANTHER HEAT SHOCK 70 KDA PROTEIN 12 50 - -
Mtr1g4466 284 PANTHER HEAT SHOCK 70 KDA PROTEIN 48 80 - -
Mtr1g4466 284 PANTHER HEAT SHOCK 70 KDA PROTEIN 90 283 - -
Mtr1g4466 284 Pfam Hsp70 protein 44 282 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4466 Mtr-Chr1 56253080 56254489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4466 42 282 Calmodulin-binding Proteins AT3G12580 48.496 2.28e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4466 K03283 - mtr:MTR_1g116250 480.33