Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4463 ATGCCTCAGCTTCGTAGTGGTGTTCGACGTCCTCGTCCTGCTGCTCCTTCTCCTCCTCCTCCTCCTCCACCCAAGCCGGCCACCAGAGGTAGACCCAGAACTAGATTAGCCGCCGCCAAGAACATCAACAAATCATCCCAGGAGGAGGACCCACCGTTGTTATTACAACCTGATACTTTCGTTGTTGAACCTCCCAAGGAGAACATAGTAATTGAAGAAGAAGCTGTTGGTGTGATGGGTGATGAAAGAGTTGGTCTTAGTGCTAATAAAGATAAGGCTGTTGCTGCTGTTCCTGAGGAAGATGCCAACTCTCCACCTCTTCCAGAAAGGGTTCAAGTAGGTGGATCACCTCTATACAAGGTAGAAAGGAAACTTGGTAAAGGTGGATTTGGCCAGGTTTTTGTTGGCCGTCGTGAGCGTGCAAATGCACCAGGAGCTGTGGAGGTTGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTATGGCCCTCCTTATGAGTGGCAAGTATACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTTATGGACATTCTTGGTCCAAGTTTGTGGGATGTATGGAATACCTCAGGCCAGTCGATGTCTCCTGAAATGGTCTCATGTATAGCTGTCGAGTCATTATCAATACTTGAAAAGTTGCATGCAAAAGGTTATGTACATGGAGATGTAAAACCAGAGAACTTTTTACTAGGCCAGCCCAACACAGCACAGGAGAAGAAATTGTTTCTTGTTGACCTTGGTTTAGCAACAAAGTGGAAAGATTCGTCAAGTGGAAAGCACACTGAATACGACCAACGCCCCGACATGTTTAGAGGGACTGTTCGATATGCTAGCGTTCATGCTCATTTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCACTTGCATATACATTAATCTTCCTTCATAGGGGTCGATTGCCATGGCAAGGTTTTCAGGGTGATGGCAAATCCTTCCTCGTTTGCAAAAAGAAAATGGGAACATCTGCTGAGATGCTGTGCTGCTTTTGCCCCGCTCCTTTTAAACAATTTCTCGAGACTGTGGTGAACATGAAGTTTGACGAAGAACCTAACTATTCCAAGCTAATATCCTTGTTTGATGGTATGCTCGGACCTAATCCTGCATTGCGGCCAATTAATACTGAAGGCGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATGTTGAGGCAGATGATGATTCACAGCCCAAAAAGAAGGTTCGTTCAGGGATTCCTGCTTCACAATGGATTTCAGTATACAATGCTAGACAACCAATGAAACAAAGGTATCATTACAATGTGGCTGATGGAAGATTAGCACAGCATATTGAGAGAGGGATTGCAGACGACCTTCTTATTAGCTGTGTATCATGTTGTTCCAATCTCTGGGCACTTATCATGGATGCTGGAACTAATTATTCGGCTCAAGTTTACAAATTATCACCATTATTTTTACACAAGGAATGGATCTTGGAACAATGGGATAAGAATTTCTACATTACTTCTATTGCAGGGGCCAGTAATGGAAGCTCTGTTGTGGTGATGTCAAAAGGTACAAGGTATACTCAACAATCATACAAAGTAAGCGAATCTTTCCCCTACAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGGTACTGCTGGAAATCGCTGGGGTATTGTTATGTCTCGCAACGCTGGATTCAGTGATCAGGTGGTGGAACTTGATTTTCTCTATCCAAGTGAAGGCATCCATAAACGTTGGGATAATGGTTATAGGATTACAGCAACTGCAGCTACATTGGATCAATCTGCGCTTATATTAAGCATTCCGAGGAACAGACCTGGTGATGAAACTCAGGAAACTCTGCGTACATCTCAATTTCCCAGCGCTCATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCCCATTTGTGCTATGGGCGCACAGTATGCTGA 2031 0.4362 MPQLRSGVRRPRPAAPSPPPPPPPKPATRGRPRTRLAAAKNINKSSQEEDPPLLLQPDTFVVEPPKENIVIEEEAVGVMGDERVGLSANKDKAVAAVPEEDANSPPLPERVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAVEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPNTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSAEMLCCFCPAPFKQFLETVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNVEADDDSQPKKKVRSGIPASQWISVYNARQPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYSAQVYKLSPLFLHKEWILEQWDKNFYITSIAGASNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGNRWGIVMSRNAGFSDQVVELDFLYPSEGIHKRWDNGYRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWSKNLYLAHLCYGRTVC* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4463 676 SMART serkin_6 119 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4463 676 PANTHER CASEIN KINASE-RELATED 68 650 - -
Mtr1g4463 676 ProSiteProfiles Protein kinase domain profile. 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4463 676 ProSitePatterns Protein kinases ATP-binding region signature. 125 152 IPR017441 GO:0005524
Mtr1g4463 676 SUPERFAMILY Protein kinase-like (PK-like) 119 397 IPR011009 -
Mtr1g4463 676 CDD STKc_CK1 119 389 - -
Mtr1g4463 676 PANTHER CASEIN KINASE I-LIKE PROTEIN 68 650 - -
Mtr1g4463 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Mtr1g4463 676 Pfam Protein kinase domain 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4463 676 MobiDBLite consensus disorder prediction 12 29 - -
Mtr1g4463 676 MobiDBLite consensus disorder prediction 1 54 - -
Mtr1g4463 676 Gene3D Transferase(Phosphotransferase) domain 1 87 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4463 Mtr-Chr1 56235095 56240595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4463 118 272 EF-hand Containing Proteins AT4G21940 27.215 2.44e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mtr1g4463 Pkinase 8.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4463 - - gmx:100819969 1105.12