Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4447 ATGTCATTTCGCGTTGCAACCCTCCGTCGCTGGTCTCTGCATACCGTTGTTTTCAATTTCTCTTCTTCTCCTTCTCCCCAATTTCAATCTCACTCCGTTCTCCACAATTTTTTGCCATGGTTGGAGAACAAAGCTTCTTCCACCATTTCTTCTTCCCTTTCCATTTCCAATTCTTCATATGGAAACTCCTTGTTTGCTTCTAAATCAATACAAACCGGTGATTGCATTTTACAAGTTCCTTATTCTCTGCAATTAACTCCGGATAATCTCCCTCCTGAAATCAAACCTTTTATCAGTGAAGATGTTGGAAATATTGCAAAACTTGCTACTGTTCTTTTAATTCACAAGAATTTGGGCCAGGACTCTGAATGGCATCCTTATATCAGCTGTCTTCCCCCGCAAGCCGAAATGCATAATACGATATTTTGGAATGAAAGTGAGTTGGAGATGATTCGTCAAAGTTCAGTTTATCAGGAAACTATTTACCAAAAGTCTCAAATTGAAAAGGACTTTTTGGAAATCAAGCCTGTTTTTCAACCATTTTGTCAAAGTTTTGGAGATTTTACTTGGAAGGACTTCATGCACGCATGCACACTAGTTGGCTCTAGAGCATGGGGAAGCACAAAGGGTTTATCTCTGATTCCATTTGCAGATTTCTTGAATCACGATGGGATTTCAGAAGCAATTGTAATGAGTGACGATGACAATAAATGCTCAGAAGTGTTCTCTGATCGTGATTATGTTCCTGGTGAACAGGTGCTTATAAGATATGGAAAGTTTTCAAATGCTACATTGATGCTGGACTTTGGTTTTACAATTCCATACAACATTTATGATCAGGTTCAGATCCAGTACGATATACCTAAGTATGATCCTCTGCGTCACACAAAATTGGAACTCTTGCAGCAATACTTTGTGCCTCCAACCAAAGATGCAAAGGGCTCAAAGTATTCCGTGAATTCCTTCGCAATCAAGGAGGTGAAGTCCGCTGGAGGAAAAGGGAAGGGTGTGCCGCAATCACTTCGTGCACTTGCTCGCGTTCTTTCTTGTACCACTCTTCAGGAGCTTAACCATTTGGTCATGGAGGCTGCGCAAACTGATGGTAGGCTGGCTAGGCACCCTTTACAGGATAGGATCAAAGAGATACAAGCACACAAGATGTTATCCTCCTTATTCATCCAATTAATTGGGGAGCACAATGCAACCATTACGTCATTAGATTCTTGCGATTCTTCATCCTCGAGTGAAAGACTTCCTGTTAGAAGACAAATGGCCCGAGATCTCTTACATGGCGAGCTTCACATTCTCAAATCTGCTTCTACCTGGCTGGAGAACTACTGTTTTTCCCTGACTTGA 1356 0.4137 MSFRVATLRRWSLHTVVFNFSSSPSPQFQSHSVLHNFLPWLENKASSTISSSLSISNSSYGNSLFASKSIQTGDCILQVPYSLQLTPDNLPPEIKPFISEDVGNIAKLATVLLIHKNLGQDSEWHPYISCLPPQAEMHNTIFWNESELEMIRQSSVYQETIYQKSQIEKDFLEIKPVFQPFCQSFGDFTWKDFMHACTLVGSRAWGSTKGLSLIPFADFLNHDGISEAIVMSDDDNKCSEVFSDRDYVPGEQVLIRYGKFSNATLMLDFGFTIPYNIYDQVQIQYDIPKYDPLRHTKLELLQQYFVPPTKDAKGSKYSVNSFAIKEVKSAGGKGKGVPQSLRALARVLSCTTLQELNHLVMEAAQTDGRLARHPLQDRIKEIQAHKMLSSLFIQLIGEHNATITSLDSCDSSSSSERLPVRRQMARDLLHGELHILKSASTWLENYCFSLT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4447 451 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 28 445 - -
Mtr1g4447 451 Gene3D - 274 446 IPR036464 -
Mtr1g4447 451 Pfam Rubisco LSMT substrate-binding 289 436 IPR015353 -
Mtr1g4447 451 Gene3D set domain protein methyltransferase, domain 1 31 271 - -
Mtr1g4447 451 ProSiteProfiles SET domain profile. 51 258 IPR001214 GO:0005515
Mtr1g4447 451 Pfam SET domain 63 258 IPR001214 GO:0005515
Mtr1g4447 451 PANTHER OS01G0976450 PROTEIN 28 445 - -
Mtr1g4447 451 SUPERFAMILY SET domain 35 276 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4447 34 229 NAC Transcription Factor Family AT3G56570 21.287 7.29e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr1g4447 SET 7.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4447 K19199 - gmx:100818002 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4447 1 56115463 56124144 Mtr1g4447 1 56115463 56124144 ECH