Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4432 ATGAGTTCCAATTGGACCAAACTTAGAGTTCATATTGAAGTCGTTTGTCTTTTGAGTACTTTTCTCGTCCATAGTGGATATGATGTTATAATGATCTCAGACACCGACTCCGTCAAACATGCCACCACGGCCGTTGGAGAAAAAACCTCCGCCGCATATTCCGATAAAGATCAACCCTCACCGCCGTCAGCTCCAATTATTGTGATGCCTTCTAGAGATCACGATTCTCTCTTCAGTGGTGGCGGCATCAGCTTACTATCTGGAAGTCGAAATGGAAGGATCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGATCTTCAATGGAGGATTTCTTTGAGACCAAAGTATCAGAGGTTGATGGTCAGATGGTTGGCTTTTTTGGTGTTTTTGATGGCCATGGAGGTTCACGAACTGCAGAATATCTGAAAAATAATTTATTCAAGAATTTGTGTAGCCACCCCGACTTTATCACAGATACTAAGACAGCCATTGTTGAAGCATTTAAACAAACAGACGTTGATTACCTCAAAGAGGAAATGGGACACGCTGGGTCCACTGCATCAACAGCCGTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATCGAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTAATAGGTCTGATGAGCGCCAAAGGATTGAACAGGCTGGGGGATTCGTAATATGGGCAGGAACATGGAGGGTTGGCGGTATTCTTGCTGTTTCCCGTGCATTTGGAGACAAGCTTCTTAGACCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGAAGGCGTGGATTTTATAATAATAGCTAGTGATGGTCTTTGGGATGTTATATCAAACGAGGAGGCAGTGTCTTTGGTACAAAATTTCACTGATGCAGAAGTGGCCTCCAGAGAACTTATTAAAGAAGCTTATACCCGAGGAAGCTCGGACAACATCACTTGTGTTGTTGTTCGATTTGATCCACATCCTATTGCGACTTCTGGCAACTGA 1044 0.4349 MSSNWTKLRVHIEVVCLLSTFLVHSGYDVIMISDTDSVKHATTAVGEKTSAAYSDKDQPSPPSAPIIVMPSRDHDSLFSGGGISLLSGSRNGRISYGYSSFKGKRSSMEDFFETKVSEVDGQMVGFFGVFDGHGGSRTAEYLKNNLFKNLCSHPDFITDTKTAIVEAFKQTDVDYLKEEMGHAGSTASTAVLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPNRSDERQRIEQAGGFVIWAGTWRVGGILAVSRAFGDKLLRPYVVADPEIQEEEIEGVDFIIIASDGLWDVISNEEAVSLVQNFTDAEVASRELIKEAYTRGSSDNITCVVVRFDPHPIATSGN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4432 347 CDD PP2Cc 94 337 IPR001932 -
Mtr1g4432 347 SMART PP2C_SIG_2 95 337 IPR001932 -
Mtr1g4432 347 SUPERFAMILY PP2C-like 88 339 IPR036457 -
Mtr1g4432 347 Pfam Protein phosphatase 2C 96 330 IPR001932 -
Mtr1g4432 347 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Mtr1g4432 347 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 57 338 - -
Mtr1g4432 347 Gene3D - 87 346 IPR036457 -
Mtr1g4432 347 SMART PP2C_4 85 335 IPR001932 -
Mtr1g4432 347 ProSiteProfiles PPM-type phosphatase domain profile. 95 337 IPR001932 -
Mtr1g4432 347 PANTHER ALPHABET, ISOFORM E-RELATED 57 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4432 Mtr-Chr1 55962967 55967192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4432 67 338 PP2C-type Phosphatase Gene Family AT1G43900 70.909 3.33e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4432 K17506 - gmx:100776867 499.59