Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4414 ATGATGGTTTCTAGAGGTCTATTCGGGTGGTCACCACCACATGTGCAACCATTAACACCTGTTTCCGAGGTTTCGGAGCCGCCGGAGTCTCCGTCACCGTTCATGGACATCGGAGGAGAGACTTCGGCGTCGCAGCAAATGGAAGCGGAGGAGGAGATGGAAGAGATGGAGGATATTGAACCGCCGCCAGCTGCTGTTCCTTTCTCTCGGTTATTTGCGTGTGCTGACCGGTTTGACTGGTTTCTTATGGTGGTTGGTTCTATCGCTGCGGCGGCTCATGGAACTGCGCTTGTTGTTTACTTGCATTACTTTGCTAAAGTTATTCGCGTTCCTCAGGAGCAGGATATGTTTCATAGGTTCAAAGAGCTTGCTTTGACCATTGTTTATATCGCTGGTGGTGTTTTTGTTGCTGGTTGGATTGAGGTTTCATGTTGGATTCTTACCGGAGAACGGCAGACAGCCGTCATCAGATCAAAATATGTTCGAGTATTACTTAACCAAGATATGAGTTTCTTTGATACTTATGGAAATAACGGAGACATTGTGAGTCAAGTATTGAGTGATGTACTGCTCATTCAGTCTGCACTCAGTGAAAAAGTTGGGAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATAGCATTGATAACATTGGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTTCATAGGCTTGCAGAGAATATCCAAGATGCATATGCCGAAGCTGCCAGCATTGCTGAACAGGCAGTTTCCTACATACGGACCTTGTCTGCATTTACAAATGAAACATTGGCAAAATATTCATATGCAACGTCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTCCAAGGGCTTGGCCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATACACGGAAAAGCTCACGGCGGGGAAATTATAACAGCTCTGTTTGCTGTCATTCTAAGTGGCTTGGGATTAAACCAAGCGGCGACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTATTCGAGATGATAAGCCGGTCATCCTCGTCTTTTGATCATGACGGAAGTGCTCCTGTGTCCGTGCAAGGAAATATAGAGTTTCGGAATGTATACTTCAGTTATCTTTCACGCCCTGAAATCCCTATCTTAAGTGGGTTTTATCTCACAGTTCCTGCTAAGAAAACTGTGGCACTTGTTGGCAGAAATGGTTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCAACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGGAGGGATACCACCACGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACACACCTTTATCAGTTCATTAGATAAAGGTTATGATACACAGATTGGCAGGGCTGGTTTAGCTTTGACCGAAGAACAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTCCTGCTTGATGAGGTTACTGGCGGACTTGATTTTGAGGCTGAAAGGTCTGTTCAGGAGGCTCTGGATCTCCTTATGCTGGGGCGCTCAACAATAATTATTGCTCGAAGGCTTAGTCTTATAAAAAATGCTGATTATATAGCAGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCACGATGAATTATTGTCCCTGGGTGGCTTATATGCAGAGCTACTTCGATGTGAAGAGGCCACTAAACTTCCAAAGAGGATGCCTGCTCGCAACTACAAGAAGACTGCAGCTTTCCAAATTGAGAAAGATTCTTCAGAGAGTCATAGCTGCAAAGAACCATCATCCCCTAGAATGATGAAGTCACCTTCTCTTCAAAGAGTTTCTGCTGTATTTCGGCCTTCAGATGGCTTCTTTAACTTACATGAATCACCACAAGTGCAGAGTCCACCACCCGAGAAGATGATGGAAAATGGTCAGTCTTTGGATTCAACCGAGAAAGAGCCCTCAATAAAAAGGCAGGATAGCTTTGAAATGAGATTACCCGAGTTACCCAAGATTGATGTTCAGTCGGTGCATCGTCAAACATCAAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAAACATTTAGCAGACCAGATAGTTATTCTGATGAATTTTCAGTGAAAATGAACGAAACAAAGGATGCACGGCATCGAGGTCAACCCTCATTTTGGAGACTGGCAGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGCGCTGCAATCTTTGGTGCGTTCAATCCACTTCTTGCTTATGTTATCGGCCTGGTGGTGACAACTTACTATCGAATTGACGACACTCATCACTTGCGGGGGGAGATAGACAAGTGGTGTTTGATCATTGCCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATAATGGGAGAGAAAATGACCGAAAGAGTCCGGAGAATGATGTTCTCAGCCATGCTACGTAATGAAATTGGATGGTACGATGATGAGGAAAACAGTGCCGACAATTTATCCATGCGTTTGGCCAATGATGCTACGTTTGTACGAGCTGCTTTCAGCAACAGACTTTCTATATTTATACAGGACATTGCTGCAGTTGTTGTTGCTTTTCTCATTGGTGTTTTGCTGCACTGGAGAATAGCTCTTGTGGCTTTAGCTACACTTCCGGTTCTCTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTGCTGGTTTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTCTACAGGCTGCAGTTAAATAGAATATTTAAGCAGAGCTTTCTTCATGGATTGGCCATTGGTTTTGCATTCGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTCTGGTACACTGCAATATGTATAAACAAGAGTTATGTAGAAGCATCTACTGCACTCAAGGAGTACATTGTTTTCTCATTTGCTACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTCAAGCGACGTAAATCTCTCATTTCAGTGTTTGAAATTATAGATCGCGTGCCTAAAATTGATCCTGATGAAAGCTCAGCCTTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTACTCGGCCTGAAGTGCTGGTATTAAGCAATTTCAGTCTCAAAGTCAGTGGGGGACAAACAATTGCAGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATTATATCTTTGATGGAGAGATATTATGATCCAGTTGCTGGCCAAGTTTTACTGGATGGGAGGGATTTAAAACTATATAATCTGAAATGGCTAAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCAATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCCAGACATAATGCCAGTGAAGCTGAAATGAAAGAGGCGGCAAGAATAGCTAATGCTCATCATTTCATTAGTAGCCTGCCTCATGGTTACGATACTCATGTTGGAATGAGAGGTGTTGACTTAACTCCAGGACAGAAACAGAGGATTGCAATTGCAAGGGTAATCCTGAAAAATGCACCTATATTGTTGTTGGATGAAGCTAGCTCATCAATTGAATCAGAATCGAGCCGAGTAGTGCAAGAGGCTCTTGACACTCTTATAATGGGAAACAAGACTACTATTTTAATAGCTCACAGGGCTGCCATGATGAGGCATGTTGACAATATAGTCGTGCTTAATGGAGGACGGATTGTGGAAGAGGGGACCCATGATTCATTGGTGGCAAAGAATGGTTTGTATGTCCGATTAATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAG 4191 0.4242 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPFMDIGGETSASQQMEAEEEMEEMEDIEPPPAAVPFSRLFACADRFDWFLMVVGSIAAAAHGTALVVYLHYFAKVIRVPQEQDMFHRFKELALTIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLSAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFDHDGSAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTTDQIEEAAKIAHAHTFISSLDKGYDTQIGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLSLGGLYAELLRCEEATKLPKRMPARNYKKTAAFQIEKDSSESHSCKEPSSPRMMKSPSLQRVSAVFRPSDGFFNLHESPQVQSPPPEKMMENGQSLDSTEKEPSIKRQDSFEMRLPELPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSYSDEFSVKMNETKDARHRGQPSFWRLAELSFAEWLYAVLGSIGAAIFGAFNPLLAYVIGLVVTTYYRIDDTHHLRGEIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEIGWYDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDIAAVVVAFLIGVLLHWRIALVALATLPVLCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNRIFKQSFLHGLAIGFAFGFSQFLLFACNALLLWYTAICINKSYVEASTALKEYIVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDESSALKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVSGGQTIAVVGVSGSGKSTIISLMERYYDPVAGQVLLDGRDLKLYNLKWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLV* 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4414 1396 PANTHER ABC TRANSPORTER B FAMILY 19 1392 - -
Mtr1g4414 1396 Gene3D ABC transporter type 1, transmembrane domain 62 381 IPR036640 GO:0005524|GO:0016021
Mtr1g4414 1396 MobiDBLite consensus disorder prediction 723 739 - -
Mtr1g4414 1396 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 824 1116 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g4414 1396 SUPERFAMILY ABC transporter transmembrane region 811 1132 IPR036640 GO:0005524|GO:0016021
Mtr1g4414 1396 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1392 - -
Mtr1g4414 1396 Gene3D - 1169 1390 IPR027417 -
Mtr1g4414 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 400 635 IPR003439 GO:0005524
Mtr1g4414 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1137 1383 IPR027417 -
Mtr1g4414 1396 SUPERFAMILY ABC transporter transmembrane region 63 375 IPR036640 GO:0005524|GO:0016021
Mtr1g4414 1396 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 375 - -
Mtr1g4414 1396 Gene3D - 391 643 IPR027417 -
Mtr1g4414 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1147 1384 IPR003439 GO:0005524
Mtr1g4414 1396 MobiDBLite consensus disorder prediction 18 42 - -
Mtr1g4414 1396 Coils Coil 246 266 - -
Mtr1g4414 1396 Gene3D ABC transporter type 1, transmembrane domain 793 1156 IPR036640 GO:0005524|GO:0016021
Mtr1g4414 1396 MobiDBLite consensus disorder prediction 696 789 - -
Mtr1g4414 1396 MobiDBLite consensus disorder prediction 655 681 - -
Mtr1g4414 1396 SMART AAA_5 1174 1361 IPR003593 -
Mtr1g4414 1396 SMART AAA_5 427 606 IPR003593 -
Mtr1g4414 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 634 IPR027417 -
Mtr1g4414 1396 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 367 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g4414 1396 MobiDBLite consensus disorder prediction 698 722 - -
Mtr1g4414 1396 CDD ABC_6TM_Pgp_ABCB1_D2_like 819 1130 - -
Mtr1g4414 1396 Pfam ABC transporter transmembrane region 85 350 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g4414 1396 Pfam ABC transporter transmembrane region 828 1090 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g4414 1396 Pfam ABC transporter 1165 1313 IPR003439 GO:0005524
Mtr1g4414 1396 Pfam ABC transporter 421 565 IPR003439 GO:0005524
Mtr1g4414 1396 MobiDBLite consensus disorder prediction 747 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4414 Mtr-Chr1 55820861 55830101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4414 59 693 Calmodulin-binding Proteins AT2G36910 43.472 3.37e-163 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4414 K05658 - gmx:100799399 2524.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4414 1 55820861 55830101 Mtr1g4414 1 55820861 55830101 ECH