Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4413 ATGTTCACAAGAAGAAAATTCCTCAATATACTTTCATCACGCAATGTTAATGTTTCCAAGCTAATTTCTCACCAATTAAATCCAAATCCACTTCCAAATCCCCAAATTTCAAACAATTTTAGGGTTTTACTATTCAATCTCTATGGAACCCAAGATTCCAAATTTCCGGAATACGAGATGCCTACTGTTACATGGGGTGTGATTCAAGGCCGCAAAGAGAAACTCGTTTCGCGGGTCATCATCTTCGATTATCTCAAGGGTTTGGGAATTATTCCTGATGAATTGCAGGATTTGGAGCTTCCTTCAACCGTTGAAGTCATGAGGGAACGTGTTGAGTTTATTCAGAAATTAGGGTTAACGATTGATGATATAAATCAGTATCCTTTGATTTTGGGTTGTAGTGTTAGAAAAAACATGATTCCTGTTTTAGGGTATTTAGAAAAAATTGGGATTTCTAGGTCTAAACTTGGTGAATTTATTAAGAATTATCCACAGGTTTTGCATGCTAGTGTTATTGTTGAGCTTGCTCCTGTTATTAAGTTTCTTAGAGGACTTGATGTAGAGAAAGATGATATTGGGTTTGTCTTGCAAAAATATCCTGAACTTTTAGGGTTTAAGCTTGAAGGTACTATGAGTACTTCAGTGGCTTATCTTGTTAGTATTGGTGTTAATCCAAGGGATATTGGTCCTATGGTTACACAATATCCTTATTTTTTAGGGATGAGAGTTGGTACTATGATAAAGCCTCTTGTTGATTACTTGGTTAATTTAGGGTTGCCTAAGAGGATTCTAGCTAGGATGTTGGAGAAAAGAGCTTATTTACTTGGTTATGATCTTGAAGAGACTGTGAAACCTAATGTTGATTGTTTGATTAGTTTTGGTTTGAGGAAGGAATATTTGCCATCGGTTATTGCTCAGTATCCACTGATTATTGGGTTGCCTCTTAAGGCGAAATTGTCTTCGCAGCAATATTTTTTCAGTTTGAAGCTTAAGATTGATCCGGAAGGGTTTGCGAGGGTGGTGGAGAAGATGCCACAGGTGGTTAGTCTTCATCAAAATGTGATTATGAAACCGGTTGAGTTTTTACTTGGTAGGGCAATACCGTCGCAGGATGTGGCTAGTATGGTGATCAAGTGTCCTCAATTGGTTGCGCTGCGAGTTGAGCTCATGAAGAACAGTTATTACTTCTTCAAAAGTGAGATGGGGAGACCTGTAAAAGAGCTTGTGGAGTTTCCAGAATACTTCACTTATAGTTTGGAATCTAGGATTAAACCTAGATACCAGAGGCTCAAGACCAAGGGGATAAAATGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGATTGCAGGGCAATTATATCGAAACCGAAAGTATAGGTCCTTCATTCTGTATTGGTGGGAAATTAGAGCTACCCGGGAATGACATAGTTTCAGATGAGGAAGAGGAGAGTGATGATGAAATGCTATACAGAAGAACTGTTTCTCTTTAG 1506 0.3811 MFTRRKFLNILSSRNVNVSKLISHQLNPNPLPNPQISNNFRVLLFNLYGTQDSKFPEYEMPTVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELQDLELPSTVEVMRERVEFIQKLGLTIDDINQYPLILGCSVRKNMIPVLGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLIIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIPSQDVASMVIKCPQLVALRVELMKNSYYFFKSEMGRPVKELVEFPEYFTYSLESRIKPRYQRLKTKGIKCSLNWMLNCSDQRFEERLQGNYIETESIGPSFCIGGKLELPGNDIVSDEEEESDDEMLYRRTVSL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4413 501 PANTHER EXPRESSED PROTEIN 43 484 - -
Mtr1g4413 501 Gene3D Transcription termination factor 3, mitochondrial 247 461 IPR038538 -
Mtr1g4413 501 Gene3D Transcription termination factor 3, mitochondrial 107 246 IPR038538 -
Mtr1g4413 501 Pfam mTERF 143 451 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 157 188 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 338 368 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 301 333 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Mtr1g4413 501 PANTHER CGI-12 PROTEIN-RELATED 43 484 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4413 Mtr-Chr1 55814249 55816112 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr1g4413 mTERF 1.1e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4413 K15032 - gmx:100809590 819.305