Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4394 ATGGAAGAAACGTTGGGTTCAGCAACAACGACAATCAATTCTTCTAATATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAAAGAAGGGACTGGTCTTGGCATCTCTGAGCAGGGTAGATTAGAACCTGTGGAAACTCGTGTAAAGAATAATAAACGAGGTTTGGGAGCAGATATAGTGAAGAAGAAGGTTGTGAAACCTGGTCACGGTGATTCCTCCAAAGGAGACAATAAGCAGGAACAGTTGTCTCAAAAGAAAGCCAAAGCACTTTCTAAACGGGTGAGAAAGATGCAAGAGATTGAAAAGAAGATGCAGGAGAAGGAATTCGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGAAAATGTATGA 369 0.4228 MEETLGSATTTINSSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETRVKNNKRGLGADIVKKKVVKPGHGDSSKGDNKQEQLSQKKAKALSKRVRKMQEIEKKMQEKEFERAFFREFWPENV* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4394 122 Pfam G-patch domain 15 57 IPR000467 GO:0003676
Mtr1g4394 122 Coils Coil 87 107 - -
Mtr1g4394 122 PANTHER BAT4 PROTEIN-RELATED 7 122 IPR039146 -
Mtr1g4394 122 ProSiteProfiles G-patch domain profile. 14 60 IPR000467 GO:0003676
Mtr1g4394 122 SMART G-patch_5 12 58 IPR000467 GO:0003676
Mtr1g4394 122 MobiDBLite consensus disorder prediction 48 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4394 Mtr-Chr1 55653795 55658014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4394 6 56 C2H2 Transcription Factor Family AT5G26610 49.020 6.21e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4394 - - cam:101497292 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4394 1 55653795 55658014 Mtr1g4394 1 55653795 55658014 ECH