Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4362 ATGTCTAACCCCGACGGAACAACTACTACAACAACCACCACGAACGGTTCAATCATTGACCCAAACCGTCAACAATTAGCCGTCAAAAAACCGCCGGCAAAAGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGTATTCGTATGCCAATCATATGCGCCGCACGTGTCTTCCAGCTCACACGCGAATTAGGTCACAAATCCGACGGTCAAACCATCGAATGGCTCCTCCGTCAAGCTGAACCCTCCATCATCGCCGCCACCGGTACCGGCACAACTCCGGCGAGTTTCTCTTCTCTCTCTGTTTCACTTCGTGGCTCCAGCAACTCTCTCCCTTCTCCTTCCTCCACTTCACTTGACCACAAACCTCTTCTCTCTCCTACGCCGTTCATTCTTGGAAAACGTATTCGCACTGATGATGATTCTTCTTCTTCCTCTGCTAAAGATGATGCTCTTTCTGTTGGTTCTCTTTCTACACCGGCGGCTCTTTGGGCTTTACCTGCGCGGCCTGATTTTGGTCAAATTTGGAGCTTTGCTGCTGCCGCCGCCGGTGCTCCTCCGCCGGAAATGATGGTTCAGTCTTTGTCTCAGCAGCAACATCAGGTTCAAGCTAATTTCTTCGCTCATCATCATCAACAACAACAGCATCAACAAGCTATGGGTGAAGCTTCAGCTGCTAGAGTTGGGAATTATCTTCCTGGTCATCTCAATTTGCTTGCTTCGTTGTCTGGTGGACATGGAAATTCTGGTCGGAGAGATGATGAACATCATTGA 774 0.5 MSNPDGTTTTTTTTNGSIIDPNRQQLAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSVSLRGSSNSLPSPSSTSLDHKPLLSPTPFILGKRIRTDDDSSSSSAKDDALSVGSLSTPAALWALPARPDFGQIWSFAAAAAGAPPPEMMVQSLSQQQHQVQANFFAHHHQQQQHQQAMGEASAARVGNYLPGHLNLLASLSGGHGNSGRRDDEHH* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4362 257 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 254 IPR005333 GO:0003700
Mtr1g4362 257 Pfam TCP family transcription factor 33 189 IPR017887 -
Mtr1g4362 257 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Mtr1g4362 257 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 254 - -
Mtr1g4362 257 MobiDBLite consensus disorder prediction 102 123 - -
Mtr1g4362 257 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g4362 257 MobiDBLite consensus disorder prediction 102 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4362 Mtr-Chr1 55323332 55325386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4362 13 255 TCP Transcription Factor Family AT5G23280 65.737 2.00e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr1g4362 TCP 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4362 K16221 - gmx:100799005 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4362 1 55323332 55325386 Mtr1g4362 1 55323332 55325386 ECH