Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4353 ATGATGTCAATGAACTGTCATGAATTGTGCAAACCAGTTACTATCTTGATTCTAGTGAACTTAGCTCTTGCTTTTGTCAATTTACTTCTTAAAATGGTTCTCAATGAAGGAATGGACTACATGTCCATTGTAACATATCGACAGGCTATTTCATTTATCTTCATGGCACCTATTGCATGGTTCTATGAAAGGAAACACAAACCGGAGGCTCACATAATATGTCTCCTTTTTCTCTCAGCTCTTATCGGTGTAACACTCCCCCAATATTTGTTTCTTCTTGGACTTGAGTATACATCTGCCACATTCTCTTGTGCATTCCTCAACATGGTGCCTGTATTTACGTTCATCATGTCACTTCCATTTGGGATAGAGAAGGTGAACATGAAAAGCAAGAGTGGCAAAGCCAAAATCTTGGGAACTATTGTGTGCATTGGTGGAGTTTTGTTATTAGCCCTTTATAAAGGAATTTCCTTTAACAACCCACAGTCTCAACATGTAGCAAATACATATACAAGTGTACCACCAGCTGCAAAGTTAGAGAAATGGATTATAGGTTCAATACTTCTGACTGCAGGTAGCCTCTTGTGGTCTTCATGGTTTGTTATACAAGAAAAGATTAGCAAAAAGTATCCATGTCAATACTCTGGCACTGCTATTTTGTCACTTTTTGCTGCTATTCAATCAACAATATTAACTTTGGTCATCAAGAGAAACAACGCCTCATGGATCATCAAAGGAAAGCTAGAAATAATGTGTTTAATATATGCTGGAATGGTGGGGTCAGGCATGTGCTATGTGGCAATGTCATGGTGCGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCTCTTTTACAGATATATGTGGCTGTCCTTGATTTCTCTATACTAAAGGAGGAAATATACTTAGGAAGTATTGCAGGATCTGCATTGGTTATTGTTGGCATGTATATTCTTTTATGGGGAAAGAGTATGGAGGGAGAGCAACGTGTCATGAAGGATACACAAGCAAATCAAGATGTAGAATGTCAATGA 1041 0.3842 MMSMNCHELCKPVTILILVNLALAFVNLLLKMVLNEGMDYMSIVTYRQAISFIFMAPIAWFYERKHKPEAHIICLLFLSALIGVTLPQYLFLLGLEYTSATFSCAFLNMVPVFTFIMSLPFGIEKVNMKSKSGKAKILGTIVCIGGVLLLALYKGISFNNPQSQHVANTYTSVPPAAKLEKWIIGSILLTAGSLLWSSWFVIQEKISKKYPCQYSGTAILSLFAAIQSTILTLVIKRNNASWIIKGKLEIMCLIYAGMVGSGMCYVAMSWCVKQRGPVFTAAFTPLLQIYVAVLDFSILKEEIYLGSIAGSALVIVGMYILLWGKSMEGEQRVMKDTQANQDVECQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4353 346 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Mtr1g4353 346 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Mtr1g4353 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Mtr1g4353 346 PANTHER WAT1-RELATED PROTEIN 10 344 - -
Mtr1g4353 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 326 - -
Mtr1g4353 346 PANTHER WAT1-RELATED PROTEIN 10 344 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4353 Mtr-Chr1 55247177 55249855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4353 8 256 Nodulin-like Gene Family AT3G30340 44.622 4.32e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4353 - - gmx:100802053 571.237