Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4340 ATGGTGACGGTGGCTATGGAAGACAACGAGAGCTGTGGCAGCGGAATACACCACCGCACGTCGTCGTCAATTCCGGCGCAAAGTCGGCAACAGCGGCAAAAAGTGGAAGTGTACAATGAAATTCTCCGTCGGCTTAAAGATTCCGGCAACGAAGAAGCTATGCAACCTGGCTTCGATGATCAGCTTTGGAATCACTTCAACCGTCTTCCTTCACGGTATGCGTTAGATGTGAATGTGGAAAGAGCAGAAGATGTTCTTATGCACAAGAGATTACTACATTTAGCACATGATCCTGCTAATAGGCCTTCGATTGAAGTTCACTTAGTTCAGCTTCATCCCTCATCTGATGGAAACTCAGCTGACTCTTTCCAATCATGTGCTCCTGGGGTAGATTCTGGTCAAAGCTCTTCAAAGTACTCGAGCAAACAAGGTATACTTCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGAAAATGATTCTGAAGACTTGGAAGAAGAACAATCTGTACATGCCAGTGTGCAATATTCACGGCCCATGCATGAAATCACCGTCTCAACAGATGACAAGCCAAAGCTTCTCAGCCAGTTAACTGCTTTGCTTGCTGAGGTTGGACTGAACATCCAAGAGGCACATGCTTTCTCGACAACTGATGGGTTCTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTAAAAGAAACTTTGGAAAAAGAAGTCTTGAAGATTGAGAGAGGTGAGAGGTCCAGTCAGCAGTCAGTATCATCTGTTGATGAGTGCGATCAATCAAGGATGAAAAATGAACTGGATCGTTTTACAATTCCAAATGATGGGACAGATGTTTGGGAAATAGATCCCAAACATTTGAAATATGGAACTCAAATTGCATCTGCGTCATACGGTGAACTATATAAAGGTATATATTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGGCTGAGCATGTTAGTTCAGAAATGCAGAAAGAGTTTGCACAGGAAGTCTACATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATGGGAGCATGTACCCAGCCCCCACGCTTATGCATAGTTACAGAGTTTATGTCTGGTGGAAGCGTGTATGACTACCTACATAAGCAGAAAGGGTTTTTTAAATTTCCTACCGTGCTCAAAGTTGCAATTGATGTTTCTAAAGGAATGAACTATCTGCACCAACATAACATAATCCATAGAGACTTGAAGGCTGCCAATCTTTTGATGGATGAAAATGGTGTTGTAAAGGTCGCAGATTTTGGCGTTGCCAGAGTGAGAGCTCAATCTGGAGTTATGACAGCAGAAACTGGGACATATCGTTGGATGGCTCCTGAGGTTATAGAACACAAGCCGTATGATCACAAGGCGGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCGTATGAATTTTTGACCCCTCTACAGGCAGCTATAGGAGTGGTTCAGAAGGGTTTACGGCCCACCATCCCCAAGAGCACTCATCCGAAGTTTGTTCAGCTTCTTGAGAAATCCTGGCAGCAAGATCCAACTTTAAGACCTGATTTCTCTGAAATCATCGAGAGCCTGCAGCAGTTAGCTAAGGAGGTTGGAGATGAAGGAGAGGAGCGGCGCAGGGATAAATCTGGAGGATTTCTGTCTGTCCTCAGACGAGGTCATCACTAA 1746 0.441 MVTVAMEDNESCGSGIHHRTSSSIPAQSRQQRQKVEVYNEILRRLKDSGNEEAMQPGFDDQLWNHFNRLPSRYALDVNVERAEDVLMHKRLLHLAHDPANRPSIEVHLVQLHPSSDGNSADSFQSCAPGVDSGQSSSKYSSKQGILPPPAFGSSPNLEALALEENDSEDLEEEQSVHASVQYSRPMHEITVSTDDKPKLLSQLTALLAEVGLNIQEAHAFSTTDGFSLDVFVVEGWPYEETEKLKETLEKEVLKIERGERSSQQSVSSVDECDQSRMKNELDRFTIPNDGTDVWEIDPKHLKYGTQIASASYGELYKGIYCSQEVAIKVLKAEHVSSEMQKEFAQEVYIMRKVRHKNVVQFMGACTQPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTVLKVAIDVSKGMNYLHQHNIIHRDLKAANLLMDENGVVKVADFGVARVRAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEFLTPLQAAIGVVQKGLRPTIPKSTHPKFVQLLEKSWQQDPTLRPDFSEIIESLQQLAKEVGDEGEERRRDKSGGFLSVLRRGHH* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4340 581 Gene3D Transferase(Phosphotransferase) domain 1 380 570 - -
Mtr1g4340 581 ProSiteProfiles Protein kinase domain profile. 301 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4340 581 SUPERFAMILY Protein kinase-like (PK-like) 286 549 IPR011009 -
Mtr1g4340 581 MobiDBLite consensus disorder prediction 1 32 - -
Mtr1g4340 581 Gene3D Phosphorylase Kinase; domain 1 291 379 - -
Mtr1g4340 581 Pfam Protein tyrosine and serine/threonine kinase 301 550 IPR001245 GO:0004672|GO:0006468
Mtr1g4340 581 Gene3D - 185 259 - -
Mtr1g4340 581 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 18 564 - -
Mtr1g4340 581 MobiDBLite consensus disorder prediction 112 155 - -
Mtr1g4340 581 SMART serkin_6 301 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4340 581 PRINTS Tyrosine kinase catalytic domain signature 375 388 IPR001245 GO:0004672|GO:0006468
Mtr1g4340 581 PRINTS Tyrosine kinase catalytic domain signature 412 430 IPR001245 GO:0004672|GO:0006468
Mtr1g4340 581 PRINTS Tyrosine kinase catalytic domain signature 458 468 IPR001245 GO:0004672|GO:0006468
Mtr1g4340 581 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Mtr1g4340 581 PRINTS Tyrosine kinase catalytic domain signature 521 543 IPR001245 GO:0004672|GO:0006468
Mtr1g4340 581 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 564 - -
Mtr1g4340 581 ProSiteProfiles ACT domain profile. 188 263 IPR002912 -
Mtr1g4340 581 Coils Coil 238 258 - -
Mtr1g4340 581 MobiDBLite consensus disorder prediction 112 143 - -
Mtr1g4340 581 SUPERFAMILY ACT-like 186 250 IPR045865 -
Mtr1g4340 581 CDD STKc_MAP3K-like 307 550 - -
Mtr1g4340 581 CDD ACT_TyrKc 186 253 - -
Mtr1g4340 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Mtr1g4340 581 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4340 Mtr-Chr1 55118002 55126223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4340 2 580 MAP Kinase Kinase Kinase AT4G35780 64.605 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr1g4340 PK_Tyr_Ser-Thr 4.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4340 - - gmx:100805180 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4340 1 55118002 55126223 Mtr1g4340 1 55118002 55126223 ECH