Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4338 ATGCAAACTATTAAAAAATCCTTCAAATCTTATGCTTCTCAAAACAATAAACATTCTAGAAAATTTTCTGCAGATTCCGACCACGAACAACTCCCTATTCTCCACGACCGCCAACACAGCAGCCGCTCTTTTCCTATGGCCGGAGACGTCGTCGTGAAAATCAACGACGACGGCGGTGAACCTTCCCAGGCCAATAACAAGATTTGGAGAGAATCCAGCTACGATTTTTGGAATGACACCGGGGACAATGTTCGTGATGAGAGTTTTGATTTCCGCAACAAAGCTAAGCTAGAGGATCCACCGTCGCAACTAATCGGAAAATTTCTTCATAAACAGCGTGCCTCCGGTGATATGTTGTTGGATATGGATTTGGAGATGGAAGAGCTGCAGAATGAAGGTAATGGCGCTGACGGAAAGTTAACGCCGGTTGAGGAATCTCCCACGGTTATTCAACGCGAGTTGAAAGTAAGTTTCGAGGAACCAGCTTCTAATTCGAATGGGATTGATGCCGTGGTGAACGATCCTGTTCGGAGAAGACACAGCAAAGACTCGCCTTCAATGGGTGAGTATGCCCGGCCTCCACAACCCCCTAATCACGACCGTCGTCGTTCTCCATCACCGGCGGGTCATGGTGGTGGTGATTGTGAGGTTTTGAGGTGTTCCTCGAATGCTTCGTTTGAGAGAAACCTCTCCATGCAGAGAAAATCAACGTTAATGAAAACTAAAACTAAGTCCAGATTAATGGACCCACCCGATGAACCTGATAGAAGATCTGGTCGGGTTGCTAAATCGAGTCAGCTTTTGTCCGGGATGATTGGGAGGAAAGGTGATGATGATGAAGATGATCCTTTTATGGAAGAGGATTTTCCAGATGAGTATAAGAAAACACATTTTAGTCTCTGGATTCTTCTTGAATGGTTGAGTTTGATTTTAATTATTGGTGCATCAGTAACAACTTTTTGTGTTCCTTTGTTGAGGGAAAAGAAACTGTGGCAGCTTAAGTTGTGGAAATGGGAAGTGATGATTCTTGTTCTAATATGTGGTAGATTGGTTTCTGATTGGGTTATTAGGATTGCTGTGTTTTGTATTGAAAGGAATTTCCTATTGAGAAAGAGGGTTCTTTATTTTGTGTATGGTGTGAGGAAAGCTGTGCAAAATTGTGTTTGGTTAGGGCTTGTTTTGATTGCATGGCATTTTCTGTTTGATAAGAGAGTTCAAAGAGAGACAAACAGTGATGTCCTTCAATATGTGACTAAGGTTTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGTTGAAAACTCTAGTGGTTAAAGTTTTAGCTTCTTCTTTTCATGTGAGTACATACTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTGATCGAAACACTCTCAGGTCCGCCTTTGGTGGAGATTCGAAAGGCGGAAGAGGAAGAGGAAAGGCTTGCTGATGAGGTTCAGAAGTTGCAAAATGCTGGTGTTAGCATACCTGCTGATCTAAGAGCTAGTGCCTTTCCTAACATCAAGAGTGGAAGGTTGAGGAGTGGAATGCTTCAGAAAAGCCCTGTGGTTAAAAGTGGCAAGTTTTCAATGCCGCTTTCCAAGAAATCTGATGATAATGGGATTGGGAATGGTGGTGGTGGGATAACTATTGATCACCTGCACAAGCTGAATCCAAATAACGTGTCCGCTTGGAATATGAAGAGGTTAATGAATATGGTTCGGCACGGGGCACTTACTACATTGGATGAGCAGATACTTGATTCTTCTGCTGATGATGAGCATGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGCGGCTGCAGGTTTATATATCCTGAGGACTTAATGCGTTTTATGCGAGAAGATGAGGCTATAAAAACCATAAATCTATTTGAAGGAGCGTCTGATTCTGGGAAAATCAGCAAATCTGCGTTGAAGAACTGGGTGGTGAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACCGCAGTGAATAAACTTCATCGAATGCTCAATTTCTTAGTTGCCATTATCATACTGGTTATTTGGCTCTTGATATTGGAAATTGCTACTACCAAATTTCTTCTTTTTGTGAGCTCACAACTTGTCTTGGTTGCATTTATATTCGGAAACACATGCAAGACTGTATTTGAAGCAATCATATTTTTATTTGTAATGCATCCATTTGATGTGGGAGATAGATGTGAAATTGATGCGACCCAGATGGTTGTAGAAGAGATGAACATCTTGACCACCGTATTTCTGAGATTCGATAATCAAAAGATAACGATCCCTAACAGTGTCCTTGCTACTAAGGCCATACATAATTTCTACCGTAGTCCTGACATGGGAGATTCTGTTGAATTCTGTATCCATGTAGCTACCCCACCTGAAAAGATTTCACTCATGAAACACAGAATACATAATTTCATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTTTTATAGTCTTGAAGGATCACGAACAATTGAACATGGTTAAAGTGGCGATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATATATCAGGAGGTCTCTTCTTATTGAAGAGTTGATGAAGATTTTCAGGGATCTCGACATTCAGTACCGTCTCATGCCTCTCGACATTAATGTTAGAGCTTTGCCTACCACTTCTGACCGTCTTCCAGCTAGTTGGACAACAATCACAAATTGA 2781 0.4178 MQTIKKSFKSYASQNNKHSRKFSADSDHEQLPILHDRQHSSRSFPMAGDVVVKINDDGGEPSQANNKIWRESSYDFWNDTGDNVRDESFDFRNKAKLEDPPSQLIGKFLHKQRASGDMLLDMDLEMEELQNEGNGADGKLTPVEESPTVIQRELKVSFEEPASNSNGIDAVVNDPVRRRHSKDSPSMGEYARPPQPPNHDRRRSPSPAGHGGGDCEVLRCSSNASFERNLSMQRKSTLMKTKTKSRLMDPPDEPDRRSGRVAKSSQLLSGMIGRKGDDDEDDPFMEEDFPDEYKKTHFSLWILLEWLSLILIIGASVTTFCVPLLREKKLWQLKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETNSDVLQYVTKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVSIPADLRASAFPNIKSGRLRSGMLQKSPVVKSGKFSMPLSKKSDDNGIGNGGGGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDSSADDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTINLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDATQMVVEEMNILTTVFLRFDNQKITIPNSVLATKAIHNFYRSPDMGDSVEFCIHVATPPEKISLMKHRIHNFIDNKKEHWYPSPFIVLKDHEQLNMVKVAIWPTHRMNFQDMGERYIRRSLLIEELMKIFRDLDIQYRLMPLDINVRALPTTSDRLPASWTTITN* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4338 926 MobiDBLite consensus disorder prediction 1 19 - -
Mtr1g4338 926 MobiDBLite consensus disorder prediction 245 260 - -
Mtr1g4338 926 MobiDBLite consensus disorder prediction 1 30 - -
Mtr1g4338 926 SUPERFAMILY Sm-like ribonucleoproteins 741 800 IPR010920 -
Mtr1g4338 926 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 924 IPR016688 -
Mtr1g4338 926 PIRSF Memb_At2g17000 26 926 IPR016688 -
Mtr1g4338 926 Pfam Mechanosensitive ion channel 693 896 IPR006685 GO:0016020|GO:0055085
Mtr1g4338 926 MobiDBLite consensus disorder prediction 157 216 - -
Mtr1g4338 926 MobiDBLite consensus disorder prediction 229 263 - -
Mtr1g4338 926 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 924 - -
Mtr1g4338 926 Coils Coil 475 495 - -
Mtr1g4338 926 Gene3D - 751 800 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4338 Mtr-Chr1 55072883 55077521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4338 49 923 Mechanosensitive Ion Channel Family AT1G78610 57.579 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4338 K22048 - gmx:102665658 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4338 1 55072883 55077521 Mtr1g4338 1 55072883 55077521 ECH