Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4264 ATGGGATCTGAAGCTGCTATGGCTCCGGAATGGGCATCGGAGGCTTGCATAATGGGAATCGACGAAGCTGGAAGAGGTCCTGTTCTTGGTCCTATGGTCTATGGTTGTTTATACTGTCCTCGCTCCTACCAAAAAACCCTTTCTACTTTGAGTTTCGCAGATTCTAAGACACTGAAAGAAGAGAAGAGGGAAGAATTGTTTGAAATTTTGAAAGCCAATGATTCTATTGGATGGGCTGTTGATGTCATTGACCCAAAGGAACTCTCGTCCAAAATGCTCAAGAAGAATAAGATAAACTTGAATGAGATATCACACGACTCTGCCATGGGTCTCGTTGATAGGGTGCTCAAAATGGGAGTGCTTCTAACTGAGGTTTATATTGATACAGTTGGAGATCCAGGGAAATATGAAGCGAAGCTGTCTAAAAATTTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTCAGTGGTGCAAGTATAGTTGCAAAGGTCACAAGAGATCGAGCTATAAGAGATTGGGTGCTTGATGAGTCTGCTGATAACATTCACAGGAAGTTTGGCTCTGGCTATCCTGGAGATCCTGCAACCAAGTCTTGGCTAGAAGATCACAAACATTCTATCTTTGGTTTTCCAACATTGGTCAGGTTTAGTTGGGGAACTTGCAGCTCTTATTTTAAAGGTGGCACTGAAGTCTTATGGGAGTCTGACTTGGATGAAGATGGTGGCAGCAATAATAATAATGGCAAGAGGCAATTGAAATTAAACAATTTGGGTTTCACCACATCCAAGAGAAGAACCGAAGAAATAGAATCAAGTGGTAAAGGGCGTTCTAGGTTTTTTCAGGCTCGGAAACTTGAGCACCTCACTCATTTCTAA 897 0.4192 MGSEAAMAPEWASEACIMGIDEAGRGPVLGPMVYGCLYCPRSYQKTLSTLSFADSKTLKEEKREELFEILKANDSIGWAVDVIDPKELSSKMLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEAKLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRAIRDWVLDESADNIHRKFGSGYPGDPATKSWLEDHKHSIFGFPTLVRFSWGTCSSYFKGGTEVLWESDLDEDGGSNNNNGKRQLKLNNLGFTTSKRRTEEIESSGKGRSRFFQARKLEHLTHF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4264 298 Gene3D Ribonuclease hii. Domain 2 188 234 IPR023160 GO:0004523
Mtr1g4264 298 PANTHER RIBONUCLEASE 4 297 - -
Mtr1g4264 298 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 15 237 IPR024567 GO:0004523
Mtr1g4264 298 PANTHER RIBONUCLEASE H2 SUBUNIT A 4 297 IPR001352 GO:0003723|GO:0004523
Mtr1g4264 298 Gene3D - 2 187 IPR036397 GO:0003676
Mtr1g4264 298 TIGRFAM TIGR00729: ribonuclease HII 17 230 IPR004649 GO:0004523|GO:0016070
Mtr1g4264 298 CDD RNase_HII_eukaryota_like 18 234 - -
Mtr1g4264 298 Pfam Ribonuclease HII 18 228 IPR024567 GO:0004523
Mtr1g4264 298 SUPERFAMILY Ribonuclease H-like 16 232 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4264 6 298 Core DNA Replication Machinery Family AT2G25100 64.846 2.07e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4264 K10743 - gmx:100779875 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4264 1 54333956 54336662 Mtr1g4264 1 54333956 54336662 ECH