Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4248 ATGGGAAAGAAAAATTTGAAACTACCTTCTCTTTTCAAAACCAAAGAAATTTCACAAAGAAAACAACATCCATGGCAATTCTTACCCTCTTGTGGCCATCCAAAAACTCTTTCTTTTCGAGTTGGTGCTGCTTCTACTTCTGCTGCTGATGATCACATATTCAAAACGGTTAATTCTGTGTTTTTTGACCAAACAGACAACATTAATATAGAAACACCAAAATCATGGTTCACAACATCATCTGAATCTGCAAGTTTCTCAACAGAATCAGAAGATTACTATTGCTACAACGACGGCGAATCATTGGAGACATTGGTACGAGGAGTTAAGTCGGAGAGATTGTTTTTCGAAGCAGAAGACACGAGTTCGATCTTAGAAAAGGCGAAGGCTAATGGTTTTCCATTCAAAGAAAGTGTTGTGTTAGCTATGGAGTCAGAGGATCCATATGAAGATTTTAAGAGATCAATGGAAGAGATTGTTGAGTCTCATGGTGTGAAAGATTGGGATGGTTTGGAAGAGCTTTTGAGTTGGTATTTGAAAGTTAATGGTAAAAATAATCATGGGTTTATTGTTGGTGCTTTTGTTGATTTGTTGATTAGTTTAGCAGCTTCTAATAATTCTAATAACTCTTGTTCTAATTTAACTTTATATTCTTCTGCTGTTTCTTCTTTTGCCTCTTCTTCACCTTTGTATCTATGTGAGGGACAGAGTGAGATTACTGAGATTGAAGATAATAATAATAATAATAATGTAACAGCTTCTTAG 765 0.3516 MGKKNLKLPSLFKTKEISQRKQHPWQFLPSCGHPKTLSFRVGAASTSAADDHIFKTVNSVFFDQTDNINIETPKSWFTTSSESASFSTESEDYYCYNDGESLETLVRGVKSERLFFEAEDTSSILEKAKANGFPFKESVVLAMESEDPYEDFKRSMEEIVESHGVKDWDGLEELLSWYLKVNGKNNHGFIVGAFVDLLISLAASNNSNNSCSNLTLYSSAVSSFASSSPLYLCEGQSEITEIEDNNNNNNVTAS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4248 254 Pfam Transcriptional repressor, ovate 145 201 IPR006458 -
Mtr1g4248 254 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 228 - -
Mtr1g4248 254 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 228 IPR038933 GO:0045892
Mtr1g4248 254 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 139 202 IPR006458 -
Mtr1g4248 254 ProSiteProfiles OVATE domain profile. 141 200 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4248 Mtr-Chr1 54141457 54142473 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr1g4248 Ovate 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4248 - - mtr:MTR_1g111640 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3282 7 49949220 49950351 Mtr1g4248 1 54141457 54142473 ECH
Mtr1g1985 1 29507750 29508705 Mtr1g4248 1 54141457 54142473 ECH
Mtr1g4248 1 54141457 54142473 Mtr1g4248 1 54141457 54142473 ECH