Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4241 ATGGCAATTGGTGTTCATGATTGGGGAGACATGAAGAGTCTCACCGTCCAAGTCATCACCGGACGGTGGTTTGTCATTTTTGCCTCCTTTCTAATCATGTCGGCTGCCGGAGCCACCTACATGTTCGGTCTATACTCCAGCGACATAAAAGAAACACTTGGCTATGACCAAAGCACACTAGACCTCCTTAGTTTTTTCAAAGATTTTGGTAGCAATGTTGGTATCCTTGCAGGACTAATCAACGAAATCTCTCCACCTTGGGTAGTTTTAGCAATAGGTGCTATACTTAATTTCTTTGGTTACTTCATGATTTGGTTATCCATAACAAAAAAAATTGCAAGACCACATGTTTGGCAAATGTGTCTTTACATTTGCATAGGTGCTAATTCTCAGTCTTTTGCAAACACCGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAATCTCGCGGAGCTGTTTTGGGAATTCTAAAAGGATATCTTGGTCTTAGTGGTGCTATCATCACACAACTTTACTCTGCTATTTATTATAATGACTCAAAGGCTTTGATTTTGCTTATAGGTTGGCTTCCTGCCGCTATTTCATTCGCTTTTCTTAGAACCATTCGGTATATAAAACCTGTTCGACAAGTCAATGAGCTTAAGGTTTTTTATAATTTCTTGTACATCTCACTTGCTCTTGCTGGTTTCTTGTTGGTTATAATTATTATAGAGAAGAGTAGTAGTTTCACACAGGGTGGGTTCGGTTTAAGTGCTGCTGTGGTGATTTTCTTGCTTTTTCTCCCACTTGCTGTTGTTTTTATTGAAGAGAACAAGATTTGGCAGAGTAAAAAGCTTGCTTTGGTTGACCCTTCACCAGTGCAAATAGTAACAGAAGCCAACAACAACCTCAGTTCAACAACCTCTGCTGTTTCAGTTTCAGTCCCAAAAAAAGATCCAAAATGGTGGGAAGATGTGTTCAATCCACCGGCAAGAGGTGAGGATTATACGATACTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTGGCATGTATTTGTGGTATTGGTGGATCATTGACAGCAGTTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTAAGTATTTGGAATTATTTAGGACGTGTTTTCTCTGGATTTGTTTCAGAATATTTTCTAACAAAGTACAGATTTCCTCGTCCTCTTATGCTTTCTTTGACTCTCTTTGTCTCTTGTGTGGGACACCTTTTGATAGCATTTGATGTGCCACAGGGTCTCTATGTAGCTTCAGTTATTATCGGATTTTGTTTTGGTGCTCAATGGCCGTTACTTTTTGCCATTATATCAGAACTCTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTATAACAAGTCCAATTGGCTTATATGTGCTTAATGTGGCGATCACTGGTCATTTGTATGACAAAGAAGCTGAGAAACAATTGGAAGCACTTGGAAAGCAAAGAATAGAAGGGCAGGAATTGAATTGTGTTGGCGTTGATTGTTTCAAGTTATCTTTCATTATTATTGCAGCTGCAACTTTCTTTGGTGCTGTTGTTAACCTTATTTTGGTCGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGGTACAGAGAAGAAGCTGAAATGGTGGAGGTAAAGAACGTGGGAAAGACAGAAGAAGGTGACAAAGTTGGCAGCAGCATCGGCATGCGGTGA 1761 0.389 MAIGVHDWGDMKSLTVQVITGRWFVIFASFLIMSAAGATYMFGLYSSDIKETLGYDQSTLDLLSFFKDFGSNVGILAGLINEISPPWVVLAIGAILNFFGYFMIWLSITKKIARPHVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYLGLSGAIITQLYSAIYYNDSKALILLIGWLPAAISFAFLRTIRYIKPVRQVNELKVFYNFLYISLALAGFLLVIIIIEKSSSFTQGGFGLSAAVVIFLLFLPLAVVFIEENKIWQSKKLALVDPSPVQIVTEANNNLSSTTSAVSVSVPKKDPKWWEDVFNPPARGEDYTILQALFSIDMLILFVACICGIGGSLTAVDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEYFLTKYRFPRPLMLSLTLFVSCVGHLLIAFDVPQGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSITSPIGLYVLNVAITGHLYDKEAEKQLEALGKQRIEGQELNCVGVDCFKLSFIIIAAATFFGAVVNLILVARTRKFYKGDIYKRYREEAEMVEVKNVGKTEEGDKVGSSIGMR* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4241 586 SUPERFAMILY MFS general substrate transporter 21 549 IPR036259 -
Mtr1g4241 586 CDD MFS_Mch1p_like 21 536 - -
Mtr1g4241 586 Gene3D MFS general substrate transporter like domains 333 551 IPR036259 -
Mtr1g4241 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 578 - -
Mtr1g4241 586 PANTHER MFS TRANSPORTER 5 578 - -
Mtr1g4241 586 Pfam Nodulin-like 22 267 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4241 Mtr-Chr1 54068084 54069844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4241 9 561 Nodulin-like Gene Family AT2G39210 71.556 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4241 - - pvu:PHAVU_007G024800g 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3131 7 48279121 48281222 Mtr1g4241 1 54068084 54069844 ECH
Mtr1g4241 1 54068084 54069844 Mtr1g4241 1 54068084 54069844 ECH