Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4240 ATGGCGGTAGGTAATTCCATTGGTGTTCATGGTTTGGGAGACATGAAGAGTCTCACCGTCCAATTCATCACCGGGCGTTGGTTCGTCATTTTTGCCTCCTTTCTAATCATGGCAGCAGCCGGAGCCACCTACATGTTCGGTCTATACTCCCCAGACATAAAAACAACACTTGGCTATGACCAAAGTACACTGAACCTCCTTAGTTTTTTCAAAGACTTTGGTAGCAACGTTGGTGTCCTTTCAGGACTAATCAACGAACTCTATCCACCTTGGGTAGTTTTGACAATAGGTGCTATTCTCAATTTCTTTGGTTACTTCATGATTTGGTTATCAGTTACCAAAAAAATAGCAAGACCACAAGTTTGGCAAATGTGTCTTTACATTTGTATAGGTGCTAATTCTCAGTCTTTTGCAAACACTGGTTCACTTGTGACTTGTGTTAAGAATTTCCCTGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTCAGTGGTGCAATCATCACACAGCTTTACTCTGCTATTTATTATGATGACACAAAGGCTTTGATTTTGTTTATTGGTTGGCTTCCTGCTGCTATTTCGTTTGCTTTTCTTCGAACCATTCGATATATGAAACCTGTTCGACAAGTTAATGAGCTTAAGGTTTTTTATAATTTCTTGTATATCTCACTTGGTCTTGCTGGATTCTTGTTGGTTATGATCATAATTCAGAAGAAGGTTAGTTTTTCACAGAGTGAGTATGGTTTAAGTGCTGCTGTCGTTATTTTCTTGCTTTTTCTACCACTTGCCGTTGTTTTCATTGAAGAGAACAAGATTTGGCAGAGTAAAAAACTTGCTTTGGTTGATCCTTCACCAGTGAAAATAGTAACAGAAGGTGAAACAGTAACTGAAACAGAAAAGGTCAACTCTGCTGTTTCAGTTTCAGCTCCAAAAAAAGATCCAAAATGGTGGGAAGATGTGTTCAATCCACCAGCAAGAGGTGAGGATTATACAATACTTCAAGCACTTTTCAGCATGGACATGTTGATACTATTTGTGGCATGTATTTGTGGTGTTGGAGGAACTTTGACAGCAATTGATAATCTTGGTCAGATAGGAACATCACTAAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTAAGCATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCTGAACATTTTCTAACAAAGTACAGATTTCCTCGTCCTCTTATGCTTACTATGACTCTCTTTGTCTCTTGTGTGGGACACCTTTTGATAGCATTTGATGTGCCAGAGGGTCTTTATGTAGCTTCAGTGATTATTGGATTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATTATATCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTGTAGCAAGTCCCCTTGGATTATATGTGCTTAATGTGAAGATCGCTGGTCATTTGTATGACAAAGAAGCAAAGAAGCAATTGGAAGCACTTGGAAAGCAAAGAATAGAAGGGCAGGAATTGAATTGTGTTGGTGTTGATTGTTACAAGTTATCTTTCATTATTATCACAGCTGCAACATTTTTTGGTGCTGTTGTTTCACTTATTTTGGTGGCTAGGACCAGAAAGTTTTACAAAGGTGACATATACAAGAGATATAGGGAAGAAGCTGAAATGGTGGAGGTAAAGAACGTAGAAAAGACAGAGGAAGATGACAAAGTTGGTCAACAGCAGCATGTTGCGACAACTTGGAATTAG 1791 0.3841 MAVGNSIGVHGLGDMKSLTVQFITGRWFVIFASFLIMAAAGATYMFGLYSPDIKTTLGYDQSTLNLLSFFKDFGSNVGVLSGLINELYPPWVVLTIGAILNFFGYFMIWLSVTKKIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLRTIRYMKPVRQVNELKVFYNFLYISLGLAGFLLVMIIIQKKVSFSQSEYGLSAAVVIFLLFLPLAVVFIEENKIWQSKKLALVDPSPVKIVTEGETVTETEKVNSAVSVSAPKKDPKWWEDVFNPPARGEDYTILQALFSMDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTMTLFVSCVGHLLIAFDVPEGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKIAGHLYDKEAKKQLEALGKQRIEGQELNCVGVDCYKLSFIIITAATFFGAVVSLILVARTRKFYKGDIYKRYREEAEMVEVKNVEKTEEDDKVGQQQHVATTWN* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4240 596 CDD MFS_Mch1p_like 25 542 - -
Mtr1g4240 596 Pfam Nodulin-like 26 271 IPR010658 -
Mtr1g4240 596 Gene3D MFS general substrate transporter like domains 337 557 IPR036259 -
Mtr1g4240 596 Gene3D MFS general substrate transporter like domains 21 219 IPR036259 -
Mtr1g4240 596 SUPERFAMILY MFS general substrate transporter 25 555 IPR036259 -
Mtr1g4240 596 Coils Coil 561 581 - -
Mtr1g4240 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 595 - -
Mtr1g4240 596 PANTHER MFS TRANSPORTER 9 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4240 Mtr-Chr1 54062814 54064918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4240 13 583 Nodulin-like Gene Family AT2G39210 71.062 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4240 - - pvu:PHAVU_007G024800g 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4240 1 54062814 54064918 Mtr1g4240 1 54062814 54064918 ECH