Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4227 ATGACTCTCCTTCAACTCACAAAAAAACCAATATTTTTCACTCTTTTTGCTATACTCATTCCAATAATTACTACAAAACTCTTTTTTACACCCTCTCTCTCAACCTCAATTGCTTGTGCCACTTTCATCACATTATTATTATGGTTTATATACCTAACTAATTCCAATTCAAACAGCCATAAGAAAAATTCTTCACCTCCAAGCCCTTTTTCTGTTCCTATATTTGGAAACTGGCTTCAAGTTGGCAATGATCTCAATCATCGTATGCTTGCATCCATGTCACAAACTTATGGACCACTTTTCCTACTCAAACTTGGTTCCAAAAACTTGGTTGTTGTCTCTGATCCAAACCTTGCCACACAAGTTCTTCATTCACAAGGTGTCGAGTTTGGTTCTCGTCCTCGTAACGTTGTCTTTGACATCTTCACTGGTAATGGACAAGACATGGTTTTCACTGTCTATGGTGATCATTGGCGCAAAATGCGAAGAATCATGACATTGCCATTTTTCACTAACAAAGTTGTTCAAAATTATAGTAACATGTGGGAACAAGAGATGGATTTGGTAGTTCAAGACCTAAAGGCTAATGAGATTGTTAAAAGTGAAGGCATTGTTATCAGAAAACGTCTTCAGTTGATGCTGTATAATATCATGTATAGGATGATGTTTGATGCCAAATTTGAGTCTCAAGAAGATCCTTTGTTTATTCAGGCTACAAGGTTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTTGAATATAATTATGGAGATTTTATACCATTGCTTAGGCCATTTTTGAGAGGCTACCTTAACAAGTGCAAGGACCTGCAAACTAGGAGGCTGGCATTTTTCAACAACTACTTCATTGAGAAGAGGAGAAAAATAATGGCAGCCAATGGGGAGAAGCATGAGATAAAATGTGCAATTGATCATATCATAGATGCTGAGAAAAAAGGTGAAATAAGTGAAGATAATGTGACTTACATAGTAGAGAACATTAATGTTGCTGCAATAGAGACAACACTATGGTCCATGGAATGGGCAATAGCAGAGTTAGTGAATCATCCAGAAGTTCAAAGCAAAATTCGTGATGAGATATCAAAAGTGCTTAAAGGAGAATCAGTTACAGAATCAAACCTAAACCAGTTACCATATTTACAAGCTACATTGAAAGAGATATTGAGATTGCATACACCAATTCCATTGTTAGTACCACACATGAACCTTGAAGAGGCTAAGCTAGGAGAGTACACTATTCCAAAAGAGTCTAAGGTAGTTGTTAATGCTTGGTGGCTTGCAAATAATCCATTATGGTGGGAAAAGCCAGAAGAGTTCAGGCCAGAGAGGTATTTGGAAGAAGAAAATGGAATTGATGCTGTTGCTGGTGGAGGGAAAGTTGATTTTAGGTTTGTGCCATTTGGTGTTGGAAGAAGGAGTTGTCCTGGAATTATACTTGCATTGCCAATATTGGGATTGATTATTGGAAAGTTGGTGTCAAATTTTGAGATGAAGGGTCCAAATGGGACAAAGATTGATGTTAGTGAAAAAGGTGGACAATTTAGCTTGCACATTGCCAACCACTCCACTGTTTTGTTCCATCCAATTATTTAG 1614 0.3748 MTLLQLTKKPIFFTLFAILIPIITTKLFFTPSLSTSIACATFITLLLWFIYLTNSNSNSHKKNSSPPSPFSVPIFGNWLQVGNDLNHRMLASMSQTYGPLFLLKLGSKNLVVVSDPNLATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVQNYSNMWEQEMDLVVQDLKANEIVKSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNNYFIEKRRKIMAANGEKHEIKCAIDHIIDAEKKGEISEDNVTYIVENINVAAIETTLWSMEWAIAELVNHPEVQSKIRDEISKVLKGESVTESNLNQLPYLQATLKEILRLHTPIPLLVPHMNLEEAKLGEYTIPKESKVVVNAWWLANNPLWWEKPEEFRPERYLEEENGIDAVAGGGKVDFRFVPFGVGRRSCPGIILALPILGLIIGKLVSNFEMKGPNGTKIDVSEKGGQFSLHIANHSTVLFHPII* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4227 537 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 8 536 - -
Mtr1g4227 537 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 118 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 Pfam Cytochrome P450 66 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 SUPERFAMILY Cytochrome P450 66 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 Gene3D Cytochrome P450 50 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4227 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Mtr1g4227 537 PANTHER OS02G0467000 PROTEIN 8 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4227 Mtr-Chr1 53929252 53931552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4227 75 535 Monolignol Biosynthesis Gene Families AT2G30490 66.379 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4227 K00487 - gmx:100812188 853.588