Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4182 ATGTTCTCACAACACCTCTTCTTGTTTTCATGCCTCCTTATAAAACAACTGCTACTATCATCATGTATCTGTCCATCTTCAATTACCTGTGGATTTCTCGGAGAAATTGAATTCCCTTTTACAAGCACACAACATCCAGATTGTGGCATGTTAGTAATACATGGTTGTGAAGACTATGAACCACAATCCAAAAAAACAATACAAAACAACAAAAGATGGTTCGATATTCTGAAAATCGAACCATTCACAATCACAATCAAAGACGACCAACTCCACGATCTTTTGCTACAAAAAAGCTGTGATATTCTAACATATGATTCAATGTTCATGGTCAACACACCTTTGGTTTCATCTCGTTTGGAATATTACGTAACTGTTTTCGGATGCAACAGCAACAACTCACTCGATCTTCAACAATACTATTCTGTTTCTAATTCTAGCTCCATTTGTAGAGAAGATACTACTACTTTGTATGGTGTTTCGGATTCGGATATAAAGAGTAATAAAACTATTGTGGTTGTAACTGATTCTGTTTCCAATTCTAATCATCTTAAAGGTTGTTCAAATGTTGAGCTTCCAACGTATTCAAAGGTTGACCGTCTTGAACCTGCTGATCTTTTTAAGGTGTTAAGCGGTGAAATTTCCATCAAATTACAAGTTTCTCAGAATTGTTCTAGCTGCCATGATCTTTATGGTGGTCAATGTCTACTTGATAACAATGGCCAGTTTTATTGTAAACAAGAGAAATCTAAAAAGACCCGTCTTAAAGTGACAGCAGTTGCATCTTCTGTTGGAGTACTGGTAGCTCTGATTTTTTTGGCTTGGTTCTTGAGAAGACACTACTTCAACAATAAAAACCCACCATACCAAATAATTGAGTTGTTTCTGAAAAACCATGGTCACCTTGCAGCTAAAAGATACACTTATGCAGAGATAAAGAAAGCAACCAATTCATTCAAATATAAGTTGGGTCAAGGAGGATATGGCAGTGTATATAAAGGAAAATTACAAGATGGAAGTCTCGTGGCAGTAAAAGTATTAAGCGAATCCGAAGGTAACGGTGAGGAATTCATCAATGAAGTTGCTAGTATTAGTGTCACTTCTCATGTTAACATAGTTGGTTTGTTGGGATTCTATCTAGAAGGTTCTAAAAGAGCTTTGATATATGACTACATGCCTAATGGATCACTTGAGAAGTTCATATATGAAAACAAAGATCCATTGAAGCTCAATCTTCAATTGAGTTGCAAAACTGTCTACAATATTGCAATTGGCGTTGCTCGGGGATTAGAGTATCTGCACAAAGGTTGCAATACTAAAATTTTACATTTTGATATAAAACCTCATAATATATTGCTAGACGATGATTTTTGTCCTAAGGTTTCGGATTTTGGACTTGCAAAAGTATGTCCAAGAAAAGAAAGTATCATATCCTTATTAGGTGCTAGAGGTACTGCAGGATACATTGCTCCAGAAGTGTTCTCTAGAAATTTTGGTGGCGTCTCTCACAAATCTGATGTATATAGTTATGGAATGATGGTTTTAGAAATGGTTGGGGGAAAACAGAATAACAATGTTGTTGAAGTTGAACTGTCGAGTGATATTTATTTTCCACAATGGATTTACAAGCGTCTTGAACTAAACCAAGAGCCAAGTTTGCGAAGCATTAAAAATGAATTTGATAAAAATATTGTACAGAAGATGATTATAGTAAGCTTATGGTGCATCCAGACAGATCCATCACATAGGCCTGCAATGAGTAAAGTGGTAGATATGATGGAAGGTAGCTTGGAATCTTTGCAAATACCACCAAAACCTTGTCTCTTTACACCTCCTAGTTCTCCCTCAAGATCATCAGAGTATAACACTCACACATCTCAGGATTTGTATTCTTCAAGCACATTCCATACAACTGATTGTGAACCTCTAATCATACCGCCTTAG 1944 0.3611 MFSQHLFLFSCLLIKQLLLSSCICPSSITCGFLGEIEFPFTSTQHPDCGMLVIHGCEDYEPQSKKTIQNNKRWFDILKIEPFTITIKDDQLHDLLLQKSCDILTYDSMFMVNTPLVSSRLEYYVTVFGCNSNNSLDLQQYYSVSNSSSICREDTTTLYGVSDSDIKSNKTIVVVTDSVSNSNHLKGCSNVELPTYSKVDRLEPADLFKVLSGEISIKLQVSQNCSSCHDLYGGQCLLDNNGQFYCKQEKSKKTRLKVTAVASSVGVLVALIFLAWFLRRHYFNNKNPPYQIIELFLKNHGHLAAKRYTYAEIKKATNSFKYKLGQGGYGSVYKGKLQDGSLVAVKVLSESEGNGEEFINEVASISVTSHVNIVGLLGFYLEGSKRALIYDYMPNGSLEKFIYENKDPLKLNLQLSCKTVYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDDDFCPKVSDFGLAKVCPRKESIISLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGKQNNNVVEVELSSDIYFPQWIYKRLELNQEPSLRSIKNEFDKNIVQKMIIVSLWCIQTDPSHRPAMSKVVDMMEGSLESLQIPPKPCLFTPPSSPSRSSEYNTHTSQDLYSSSTFHTTDCEPLIIPP* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4182 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Mtr1g4182 647 SUPERFAMILY Protein kinase-like (PK-like) 301 593 IPR011009 -
Mtr1g4182 647 Pfam Protein kinase domain 321 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4182 647 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 30 633 - -
Mtr1g4182 647 ProSiteProfiles Protein kinase domain profile. 317 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4182 647 Gene3D Transferase(Phosphotransferase) domain 1 392 602 - -
Mtr1g4182 647 Gene3D Phosphorylase Kinase; domain 1 296 391 - -
Mtr1g4182 647 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Mtr1g4182 647 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 633 IPR045874 GO:0004672
Mtr1g4182 647 MobiDBLite consensus disorder prediction 603 625 - -
Mtr1g4182 647 SMART serkin_6 317 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4182 Mtr-Chr1 53416382 53420131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4182 261 627 Receptor kinase-like Gene Family AT4G18250 53.439 5.18e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g4182 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4182 - - gmx:100785979 803.127