Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4089 ATGTATCATCTAATTAAGGAAAACATCATGAGACTAAACACACTCTTGAGAGTTTCATCTTTTCTTTTTCTTCTACTGCTTCAATATTCATATGCACTTAACTCTGATGGAATTTTCTTGCTTAAATTCAGATACTCCATCCTCAGTGACCCTTTATCAGTCTTTGAAACATGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTGCATGCAGTGAATTAGGATCTCCTGATACACCTGATTTCTTAAGAGTAACTAGCTTAATCCTTCCAAATAACCAACTTCTTGGTTCCATTGCAGAAGATTTAGGCCTAATCCAAAACCTTCATCACATTGATCTCTCAGACAATTTCCTCAATGGTTCATTACCTAACTCTATCTTCAACTCTTCTCAACTACAATTCCTTTCACTCTCCAACAATAAAATCTCAGGTAAGCTACCTGAGTTGATTGGTTTATCCACAAACCTTCAAAGTCTAAACCTTTCTGACAATGCCTTTGTTGGGTCAGTCCCAAAAAACCTCACTTCTCTACAGAATCTAACCGTTGTTTCTTTGAAAAGTAACTATTTTTCTGGTGAAATTCCAAATGGGTTCAACTCTGTTCAGATTCTAGATCTGTCCTCAAATTTGTTCAATGGTTCTCTTCCAAATAACTTTCAAGGCCAAAATCTCCAATACTTGAATCTCTCTTATAATAAAATCTCAGGACCAATTCCAAAAACATTTGCTAAGCACATTCCTGAAAATTCTACAATTGATCTCTCATTCAACAATCTAACAGGAACAGTACCTGAATCAATGGCTTTGCTCAATCAAAAAGCAGAATCACTCTCTGGAAACTCTGATCTGTGTGGAAAACCTTTGAAGAATCTTTGTATAATTCCCTCAAGTATCTCTACTCCTCCAGAGAACATCAACAACACATCTTCACCAGCAATTGCAGCAATGCCAAGAACAGTTAATTCAACACCAGGAACAAACACAACATCAACTAGTGATTCTTCTCAGAATGGTCTAAAACCTACTACAATAGCAGCCATTGTTGTAGGTGACATAGCAGGCATGGGAATTTTAGCTCTTATCATTCTTTGTGTATATCAACAAAGAAAGAAAAGATATACAAAACAAAACACTGTAATTCATGAGAAGAAAGTGTTAGAAAGTGTTGTGCAACAAGACCAAGAAGATGTGAAAACACAAACACATTCACGACTTCAATGTTCTCCGTGTTGTTTAACGATTAAACAAGACGAGATATCAGAAGATCCAAGCTCGGATGAGAGTGAACGCGACATTAAAAGTATCATTGTGGACAACGGGAAGCTTCCGAATGAAGGCACGTTGGTAACGGTGGACGGTGAGACGAAGCTGGATTTGGAGACATTGTTGAAGGCTTCAGCTTATATACTTGGAACAAGCCGTGCAAGTATTGTGTATAAAGCAGTTTTACAGGATGGAAGAGTTTTTGCTGTTAGAAGGATTGGTGAGTGTGGTGTTGAAAGAATGAAGGAGTTTGAGAATCAAGTGAGAGCTATTGCTAAGGTTAAGCATCCTAATTTGGTTAAGATTCGTGGGTTCTGTTGGGGTGAAGATGAAAAGCTTGTTATTTCTGATTATGTTCCTAATGGCAGCCTCTCAAGTATTGGTTACAGAAGAGGAGGGTCGTCCCCTATGAACTTATCCTTGGAGGTGCGTTTGAAGATAGCAAAAGGAGTTGCAAGAGGACTAGCTTATCTTCACGAGAAGAAACACGTGCATGGCAATGTTAAACCAAGCAACGTCTTATTAAATTCAGAAATGGAACCCATCATAAGTGATTTTGGAATTGACTTGCTTCTCTTGAATGATATCAACCATAGAGGGAATGGTTCATTTAGACATTTAGTGAACCAGAGAACCCCACAACAACAAGACATTTCCATTGGTTCAACTCCTAGCCCCTATGGAACAATGGGGCCATCATCATCTACTTGTGGGGGTCAAGTGCCATACCAAGCACCAGAATCGTTTCAAAACATAAAATCAAACCCCAAATCGGATGTGTATTCATTTGGAGTTATTTTGTTGGAGATTTTAAGTGGGAGGGTTTTCTCGGACCTGGAGTTAGACCAATGGTCTATTCCCGGTTCGGTTGAAGAGGAGAAAAACCGGGTTTTGAGAATGGTTGATGTGGCAATTAAGCATGAGATTGAAGGTAGAGAAAATGTGGTGCTCACGTGTTTTAAGTTGGGGTTAAATTGTGTTTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAAGCACTACAAATTTTAGAGAAGATGGCTACATTTGTTATTAATTAA 2334 0.3856 MYHLIKENIMRLNTLLRVSSFLFLLLLQYSYALNSDGIFLLKFRYSILSDPLSVFETWNYDDATPCSWHGVACSELGSPDTPDFLRVTSLILPNNQLLGSIAEDLGLIQNLHHIDLSDNFLNGSLPNSIFNSSQLQFLSLSNNKISGKLPELIGLSTNLQSLNLSDNAFVGSVPKNLTSLQNLTVVSLKSNYFSGEIPNGFNSVQILDLSSNLFNGSLPNNFQGQNLQYLNLSYNKISGPIPKTFAKHIPENSTIDLSFNNLTGTVPESMALLNQKAESLSGNSDLCGKPLKNLCIIPSSISTPPENINNTSSPAIAAMPRTVNSTPGTNTTSTSDSSQNGLKPTTIAAIVVGDIAGMGILALIILCVYQQRKKRYTKQNTVIHEKKVLESVVQQDQEDVKTQTHSRLQCSPCCLTIKQDEISEDPSSDESERDIKSIIVDNGKLPNEGTLVTVDGETKLDLETLLKASAYILGTSRASIVYKAVLQDGRVFAVRRIGECGVERMKEFENQVRAIAKVKHPNLVKIRGFCWGEDEKLVISDYVPNGSLSSIGYRRGGSSPMNLSLEVRLKIAKGVARGLAYLHEKKHVHGNVKPSNVLLNSEMEPIISDFGIDLLLLNDINHRGNGSFRHLVNQRTPQQQDISIGSTPSPYGTMGPSSSTCGGQVPYQAPESFQNIKSNPKSDVYSFGVILLEILSGRVFSDLELDQWSIPGSVEEEKNRVLRMVDVAIKHEIEGRENVVLTCFKLGLNCVSLVPQKRPSMKEALQILEKMATFVIN* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4089 777 Gene3D Ribonuclease Inhibitor 33 202 IPR032675 -
Mtr1g4089 777 SUPERFAMILY L domain-like 38 292 - -
Mtr1g4089 777 Pfam Protein kinase domain 473 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4089 777 Gene3D Transferase(Phosphotransferase) domain 1 543 775 - -
Mtr1g4089 777 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 28 773 - -
Mtr1g4089 777 ProSiteProfiles Protein kinase domain profile. 467 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4089 777 Pfam Leucine Rich Repeat 226 246 IPR001611 GO:0005515
Mtr1g4089 777 Pfam Leucine Rich Repeat 110 129 IPR001611 GO:0005515
Mtr1g4089 777 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Mtr1g4089 777 ProSiteProfiles Leucine-rich repeat profile. 134 156 IPR001611 GO:0005515
Mtr1g4089 777 SUPERFAMILY Protein kinase-like (PK-like) 472 771 IPR011009 -
Mtr1g4089 777 Gene3D Phosphorylase Kinase; domain 1 448 542 - -
Mtr1g4089 777 MobiDBLite consensus disorder prediction 319 340 - -
Mtr1g4089 777 CDD STKc_IRAK 473 771 - -
Mtr1g4089 777 Gene3D Ribonuclease Inhibitor 203 296 IPR032675 -
Mtr1g4089 777 PANTHER OS04G0122200 PROTEIN 28 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4089 Mtr-Chr1 52448393 52451822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4089 10 771 Receptor kinase-like Gene Family AT4G37250 49.482 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g4089 Pkinase 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4089 - - gmx:102667237 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4089 1 52448393 52451822 Mtr1g4089 1 52448393 52451822 ECH