Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4070 ATGATTTCCCATTCCTTCTCATTAGCTATGATTTTGCTCCTATTTCTTTTCATTTTTCAGCTTCTCTCTTACTTAAAGAGAAACAAGAAGTTGCATGCACGATTACCACCTCACCCTCCAAGTCCACCAGCAATACCAATAATTGGACATCTTCATCTCCTCAAACCACTCATTCATCAGGCCTTTCGCCACCTCTCCGATCAATATGGCCCTTTAATATCCCTTCGACTTGGCTCCTCTCAATTTATCATTGTTAACACTCCATCACTCGCCAAAGAGTTTCTCAAGACACATGAGCTCACTTATTCTCACCGTAAAATGAGCATAGCCATCAACGTAGTTGCCTATGATGATGCAACTTTTGCTTTCGCTCCTTATGGGACTTATTGGAAATTTATTAAAAAGCTCAGCACCACTGAGCTCTTGGGTAATCGAACCATGGCACAATTTCTACCGATTCGAACCCAAGAACTCCATGAATTCATTCAAACTTTGGCAAATAAGTCTAAGGCAGAAGAAAGTGTGAACCTCACACAAGCTTTGATAAAGCTTTCCAACAACATAATATCACGGATGATGTTGAGTATTGATTGCTCAGGAACAGATAACCAAGCAGAACAAGTTAGGGCTTTGGTTCGCGAGGTAACACAGATTTTTGGAGAATTTAATGTTTCAGATTTTATAGGAATTTTCAAGAACTTTGACTTGCAAGGTTTTAAAAAGAGGGCCTTGGACATACACAAAAGGTATGATGCTTTGTTGGATAAGATTATTTCTGATCGTGAAGAACTAAGAAGGGAAGCCAAGCTAATAGATGGTGGTGGTGAGAATGGTGAAGAAGAGAGACTGAAAGATTTTCTTGACATTTTGCTAGATGTCTACAGTGAGAAAAACTGTGAAGTCAACTTTACTAGAAATCATATCAAATCATTAATATTGGATTACTTTACGGCAGCAACCGACACTACTGCCATCTCCGTGGAATGGGCAATATCAGAACTGTTTAACAATCCAAGGGTGCTGAAAAAAGCACAAGAGGAGGTGGATATAGTTACTAGAAAGGAAAGACTTGTGTGTGAAGAAGACGGTCCAAACCTTCCTTATATACATGCTATCATAAAAGAAACAATGAGGCTTCATCCCCCGATACCGATGATTATGAGGAAGGGAATGGAAGATTGTGTGGTTGATGGTAACATGATTCTGAAAGGCTCAATGGTTTGTGTAAACATTTGGGCTATGGCAAGGGACCCAAAGATATGGGAAAACCCATTAGAGTTTAGGCCAGAAAGGTTTTTAGAAAACAAAGATATTGACATGAAAGGGCACCAGTTTGAGTTGTTGCCATTTGGTTCTGGAAGGAGAGGTTGTCCTGGTATGCCTTTGGCCCTACGTCAATTACCCACTGTAATTGGTGCTTTGGTACAATGCTTTGAGTGGAAGATGCTTGATTCGGAATGTAAGATCTTAGATCAAGGCAAAAAAATTGATATGGATGAACGGCCTGGATTGACTGCTCCTAGGGCCAATGATCTTATTTGTATTCCAGTTGCAAGATTGAACCCCCTTACATTTCTTCAACTTTAG 1587 0.3995 MISHSFSLAMILLLFLFIFQLLSYLKRNKKLHARLPPHPPSPPAIPIIGHLHLLKPLIHQAFRHLSDQYGPLISLRLGSSQFIIVNTPSLAKEFLKTHELTYSHRKMSIAINVVAYDDATFAFAPYGTYWKFIKKLSTTELLGNRTMAQFLPIRTQELHEFIQTLANKSKAEESVNLTQALIKLSNNIISRMMLSIDCSGTDNQAEQVRALVREVTQIFGEFNVSDFIGIFKNFDLQGFKKRALDIHKRYDALLDKIISDREELRREAKLIDGGGENGEEERLKDFLDILLDVYSEKNCEVNFTRNHIKSLILDYFTAATDTTAISVEWAISELFNNPRVLKKAQEEVDIVTRKERLVCEEDGPNLPYIHAIIKETMRLHPPIPMIMRKGMEDCVVDGNMILKGSMVCVNIWAMARDPKIWENPLEFRPERFLENKDIDMKGHQFELLPFGSGRRGCPGMPLALRQLPTVIGALVQCFEWKMLDSECKILDQGKKIDMDERPGLTAPRANDLICIPVARLNPLTFLQL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4070 528 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 8 523 - -
Mtr1g4070 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Mtr1g4070 528 Coils Coil 247 267 - -
Mtr1g4070 528 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 523 - -
Mtr1g4070 528 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 SUPERFAMILY Cytochrome P450 39 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g4070 528 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4070 Mtr-Chr1 52280622 52282731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4070 8 525 Cytochrome P450 AT5G06900 40.385 1.54e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4070 K23179 - gmx:100783503 771.926