Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g4060 | ATGATGATTGAGGGAGATCAAACAAGTCTTACAACAGCAACCAAGGAACAACCAGGCGAAGTGATTGACAGAGATAAGAACATCGATGATGGAAGCGAAGATGACAGCCCCAAAGAGTGGTTAAACCTGAGCTTAGGAGGCACTTCACTCTCAACAGCTGGAGACCCTGATTCACAATCAAGACCAACCAAAGTTTTTTCATGCAATTTTTGCTTGAGAAAGTTCTTTAGTTCACAGGCATTAGGAGGTCATCAGAACGCTCACAAAAGGGAACGAGGTGCAGCAAGAAGATATCAATCTCAGAGTCAGAGGACGATGGCACTAATGGGCCTGTCCGTGAACAATCCAATGCTTCGATCACTTGGTGTCCAAGCCCATTCACTAGTGCACAAGCCATGCAGAAGTGGAACTATGGTGGCGCCAAGCTTTCAAGAAGCATATGCAGCAGGGCTCGGAATGGCAGGTACACCTTTCATGTCTGAGGATCATACTAATCAGGTGTGGCCAGGCAGCTTCCGTATGGTTCCACAACAGCCCCAGCCACCACAGGAGACACTAAAGCTTGATTTAGACCTCAGACTCTGA | 585 | 0.4735 | MMIEGDQTSLTTATKEQPGEVIDRDKNIDDGSEDDSPKEWLNLSLGGTSLSTAGDPDSQSRPTKVFSCNFCLRKFFSSQALGGHQNAHKRERGAARRYQSQSQRTMALMGLSVNNPMLRSLGVQAHSLVHKPCRSGTMVAPSFQEAYAAGLGMAGTPFMSEDHTNQVWPGSFRMVPQQPQPPQETLKLDLDLRL* | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g4060 | 194 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 68 | 88 | IPR013087 | - | |
Mtr1g4060 | 194 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 66 | 93 | IPR013087 | - | |
Mtr1g4060 | 194 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 10 | 194 | - | - | |
Mtr1g4060 | 194 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Mtr1g4060 | 194 | Gene3D | Classic Zinc Finger | 50 | 113 | - | - | |
Mtr1g4060 | 194 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
Mtr1g4060 | 194 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Mtr1g4060 | 194 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 10 | 194 | - | - | |
Mtr1g4060 | 194 | SUPERFAMILY | beta-beta-alpha zinc fingers | 63 | 92 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g4060 | Mtr-Chr1 | 52148638 | 52150274 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g4060 | 13 | 182 | C2H2 Transcription Factor Family | AT1G24625 | 35.593 | 7.54e-20 | 81.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g4060 | - | - | ahf:112779836 | 255.373 |