Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4052 ATGGTGAATGAAAATTTTCAGAGTGTTGGTGAATATCCTGAATTTTCATCACAAATAAATCGTGGTGGAATGACAAGAGATAATGAAGTCGCTCCAACTCCTAAGAGTAAGAGAAACCAGCAACCATCATGGAACACTGAACAAAATTTGGTGTTAATTAGTGGGTGGATAAAATATGGAACATACAGTGTTGTCGGGAGAAACCAGACAAGTGAAGCATATTGGGGTAAAATTGTTGAGTATTGTAACGAGCATTGCTCATTCGATTCTCCGCGCAATGTAGTTGCATGCCGAAACCGTTTTAATTATATGAACAAATTAATAAATAAATGGGTTGGTGCTAAGCGTATGCAAAGAAGCGGTTGGTCGGAAGATGATGTTTTGGCAAAAGCCCAGGAATTATATGCATGTGGGAAGAATGTTCAATTTACTTTAAAGGAAGAATGGCACGCTCTCTGA 459 0.3834 MVNENFQSVGEYPEFSSQINRGGMTRDNEVAPTPKSKRNQQPSWNTEQNLVLISGWIKYGTYSVVGRNQTSEAYWGKIVEYCNEHCSFDSPRNVVACRNRFNYMNKLINKWVGAKRMQRSGWSEDDVLAKAQELYACGKNVQFTLKEEWHAL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4052 152 PANTHER PUTATIVE-RELATED 1 152 - -
Mtr1g4052 152 PANTHER - 1 152 - -
Mtr1g4052 152 MobiDBLite consensus disorder prediction 16 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4052 Mtr-Chr1 52095545 52096003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4052 22 152 Glutathione S-transferase Gene Family AT5G41240 25.899 9.13e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4052 - - mtr:MTR_3g067785 291.967