Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4045 ATGCTGCGTTTGTGCTTAAGCCCTCTCGATTTCTGCTTCCGTCGCCGTGGTGCCTCTGACTTTCTCCTCTGGCACACAGACTTGAAACCTCACGCCTCCGGTGATTTCTCAATTGCCGTTGCTCAGGCTAATTACTCTCTCGAAGATCAAAGTCAAGTCTTCACCTCTCCTTCTGCCACCTATGTCGGTGTTTATGACGGTCATGGTGGTCCTGAAGCTTCTAGATTTGTCAACAACCGTCTTTTCCCCTATTTACACAAATTTGCCTCTGAGCAAGGGGGATTGTCAGCAGATGTGATAAAAAAGGCGTTTAGTAAGACCGAGGAGGACTTTTTGCATTTGGTTAAGTTGTCGTTGCCAATTAGTCCTCAGATTGCGTCTGTGGGATCGTGTTGTCTTCTTGGTGCAATTTCTGATAATGTGTTGTATGTTGCCAACCTGGGTGACTCTAGAGTTGTTCTTGGTAGGAAGTATCTTGAGAACAAGAATTGTCATGTGGAGGCTGTGCGCTTGTCAACGGATCATAATGTAGCTGATGAGGAGGTGAGGAGAGAAGTTGAAGCTCTCCACCCTGATGATTCACACATTGTGGTTTATAGCCGTGGTGTTTGGAGGATTAAGGGCATCATACAGGTGTCTAGATCTATTGGTGATGTGTACTTGAAGAGACCAGATTTCTACAGAGATCCCATTTTTCGGCAATTTGGAAATCCTATTCCTTTGAAGCGTCCAGTAATGACAGCTGAACCATCAATCATCATTAGGGAGCTTGAGTCAGATGATTTATTCTTAATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGATATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTAAGAGCTGCTCTTCAGGAAGCTGCAAAGAAAAGAGAGATGAGATATGCTGACATAAAGAAAATTGACAAAGGAATTAGAAGACACTTCCATGACGATATCACCGTTATCGTGATCTATCTTGATCAGCATGGAAGTTCTTCTAGTGGTGAATTTAAGCAAACTGCTGTTGGGTATACAACTGCCCCTGTTGATATATTTTCTCTAAATGCTGATGAATCTGAGAAGAGCATGCTTGGTTCAGTTGGCTAA 1140 0.4307 MLRLCLSPLDFCFRRRGASDFLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNNRLFPYLHKFASEQGGLSADVIKKAFSKTEEDFLHLVKLSLPISPQIASVGSCCLLGAISDNVLYVANLGDSRVVLGRKYLENKNCHVEAVRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFRQFGNPIPLKRPVMTAEPSIIIRELESDDLFLIFASDGLWEQLSDEAAVDIVFKYPRAGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVIVIYLDQHGSSSSGEFKQTAVGYTTAPVDIFSLNADESEKSMLGSVG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4045 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Mtr1g4045 379 CDD PP2Cc 48 337 IPR001932 -
Mtr1g4045 379 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Mtr1g4045 379 SMART PP2C_4 29 335 IPR001932 -
Mtr1g4045 379 Gene3D - 26 345 IPR036457 -
Mtr1g4045 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 374 - -
Mtr1g4045 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 374 - -
Mtr1g4045 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Mtr1g4045 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4045 Mtr-Chr1 52044358 52047119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4045 1 344 PP2C-type Phosphatase Gene Family AT3G51370 54.648 2.99e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4045 - K01102 gmx:100812137 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4045 1 52044358 52047119 Mtr1g4045 1 52044358 52047119 ECH