Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4007 ATGGCGAGTGACGAGAGGGTAGTGAGGCGACAGATTGGTAGGAAAGGAAGTATGGCGAGAACATGGCTGCTGATGGGCAGTGAGGGGCAGAGACAGATGGTGGAGGCAAGTAGGCAGTTGATAATGCAGAGGACAGGGCTGACTGCTAGGGACTTTAGGATTCTTGATCCTATGTTGTCATACTCTTCCACAATCGTGGGGCGTGACAGAGCAATTGTCTTAAACTTGGAACAAATTAAGGCTATCATCACTGCACATGAGGTTCTTTTGCTCAATTCTAGAGACCCTTCTGTTATCCCTTTTGTTGATGAACTTCATGCACAAATTCTTCATCATCACACTACTGTTACTGATCATCCTCAACCTCAGGGTCTAGATGGGAAGGATAAGGGTGAAATGAGGCAAGATAGCAGCAGGAAGAAGATTCTTCCGTTTGAGTTTGTTGTGTTGGAGGCATGCCTCGAAGCTGTTATTAGTTCCTTAGAAAATGAGGCAAATATTTTGGAATTGGAGGCTCTCCCCGCTTTAGATAAGTTGACTTCAAAGATTAGTACTCTTAATTTGGAACGTGTTCGTCATATTAAGAGTCGATTAGTTGCCTTAACTGCTCGTGTTCAAAGGGTAAGAGATGAATTAGAAAACTTGTTGGATGATGATGGAGATATGGCTGAGCTATATTTGACAGATAAGTTGGCTCAAAAGAAGTTTGAAAATTCTTCTACTTTTTCATCCATGAATAATAACGGGGATGACATGATGATGAACCGGGTTCTTCAACCAAATATAGTTGACAGGACTGGTCACGAAATATCATTGGAACGAGGTGGAGATTCTACATGTGATCATGGAGATTATGAAAATGTTGTTGGTGAAGAAATCTCTGGGACACAAGCTGGTACTGTCTATAGTGGCGTAACCAATGTTTCTGAGCTTGAGATGCTGTTGGGAGCATACTTTGTGCAAATTGGAGGCACAGTCAACAAAATATCTGCGCTGAGTGACTATGTTGAAGACACAGAGGACTACATAAACATTACATTGGATGATAATCAGAACCGTATTCTGCAAACTGGAGTTCAGATAGGCACAGCAAGTGTGATTCTGAATTGCTTTGTTGCTGTGACAGGTGTTTTTGGTATGAATATTCACATTCAACTATTTGATGATGGTGGAATGAAAGAATTCCTTGGAACTATTTTTGGATGCACTGGTGCTTGTGTCATCTTATACTTCCTTGCCATGCTTTGGTACAAGAAAATGCGCATGTTGGAATAG 1275 0.4157 MASDERVVRRQIGRKGSMARTWLLMGSEGQRQMVEASRQLIMQRTGLTARDFRILDPMLSYSSTIVGRDRAIVLNLEQIKAIITAHEVLLLNSRDPSVIPFVDELHAQILHHHTTVTDHPQPQGLDGKDKGEMRQDSSRKKILPFEFVVLEACLEAVISSLENEANILELEALPALDKLTSKISTLNLERVRHIKSRLVALTARVQRVRDELENLLDDDGDMAELYLTDKLAQKKFENSSTFSSMNNNGDDMMMNRVLQPNIVDRTGHEISLERGGDSTCDHGDYENVVGEEISGTQAGTVYSGVTNVSELEMLLGAYFVQIGGTVNKISALSDYVEDTEDYINITLDDNQNRILQTGVQIGTASVILNCFVAVTGVFGMNIHIQLFDDGGMKEFLGTIFGCTGACVILYFLAMLWYKKMRMLE* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4007 424 Coils Coil 198 218 - -
Mtr1g4007 424 MobiDBLite consensus disorder prediction 113 133 - -
Mtr1g4007 424 Gene3D Magnesium transport protein CorA, transmembrane region 101 354 - -
Mtr1g4007 424 CDD Mrs2_Mfm1p-like 22 421 IPR039204 -
Mtr1g4007 424 Gene3D - 6 93 - -
Mtr1g4007 424 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 424 IPR039204 -
Mtr1g4007 424 PANTHER MAGNESIUM TRANSPORTER MRS2-3 14 424 - -
Mtr1g4007 424 Coils Coil 151 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4007 Mtr-Chr1 51694804 51699137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4007 21 424 MRS2 Gene Family AT3G19640 52.596 4.29e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4007 - - aprc:113872466 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4007 1 51694804 51699137 Mtr1g4007 1 51694804 51699137 ECH