Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3985 ATGGATGAGTTCTACAAAGCCAAAAAAAAGACTTTGAAGGAGACTTCAAAATCAAAGAAGAAGAAATCTCATGTAACAACTAAACCTAACGATGGTCTTGAATATAGCAAGGAAGAGATGACGTTGCGGGAATTTGACATGAATACGGCGTATGGACCATGTTTAGGAATGACTAGACTAGAACGATATGAACGTGCACGAAAATGGGGATTGAAACCTCCACCCAAAATTGGGATGATTTTGAAAGCTTTTAATGTTGATAAAGAGTGCTTGTTGCACGACCGCTTAGGGTTCTTTGAAAAAAAGTTCTAA 312 0.3782 MDEFYKAKKKTLKETSKSKKKKSHVTTKPNDGLEYSKEEMTLREFDMNTAYGPCLGMTRLERYERARKWGLKPPPKIGMILKAFNVDKECLLHDRLGFFEKKF* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3985 103 Pfam DNA polymerase delta, subunit 4 9 83 IPR007218 GO:0000731|GO:0006260
Mtr1g3985 103 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 15 94 IPR007218 GO:0000731|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3985 Mtr-Chr1 51493914 51494508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3985 23 96 Core DNA Replication Machinery Family AT1G09815 50.000 4.47e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3985 K03505 - mtr:MTR_5g006580 82.4185