Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3981 ATGGCTCTATTTCCCTTTCTTTGTTATCTTTTTTTCATAGCTGCATACCATGCAAAAGCCGATGATGCATTATGTGATAACAACATAGGCAACTACACATCCAATAGCACCTATGACAACAACCTTAAAACTCTTTTGTCCAGTCTTTCTTCTCATACAGAAATCAACTACGGTTTCTACAATTTCTCATATGGCGAAGAACCAAACAAAGCATATGTCATAGGGGTGTGTCGCGGAGATATTGAGCCAAATCAGTGTCGTACAAACCTAAACAATTCCATTGGTTATCTCAGAGAGCAGTGTCCAAACCAAAAAGAGGCAATTGTGTGGGGTGGTGATTTCACTTTGTGGTACTCGAATCGCTCAATTTTTGGGCTCTTGGAAACTTCACCTACACTCTATTTGTATTTACAACGGAATACAAGTTATGTGGATCAGTACATGCAAGCAGTGGCTAACTTGATGCGAAATCTAACGGCCAAAGCTGCTTTAGGTGACTCGCGTCGTAAGTACGAAGCAGATAGTGTCTTTGAAACTACAAGTTTCGAAACCATATACGGTTATGTGCTTTGTATGCCTGATTTGTCATCGCAACAATGCACCGATTGCTTGAACGCAGCTATCTCAGAAATCCCAAATTGTTGTAACGGGAAGATGGGAGGAAATGTTCTTAAACCAAGTTGTCGTCTTAGATATGATCCTTATCGCTTCTTCAATTCCACGATTGTCTTAGACTCACCACCATCCACCAATAACACTTCTTCAGGACAAAGCAAAACTGGAACAGTCATTGCTGTTGTAGTGCCCGTTGTTACCGTGGTTTTGGTGCTCATTTTGATTTGCATCTACTTAAGATTGAGAAAGCGAAAGCAATTCTCCAAAGCCAATAATGGAGCATATGAGGATGGAGATGAAGATGAAGATGAAATTACGATTGTCGAGTCTTTGCAATTTAACTTTGATACCATACGAGTTGCTACAAGTGACTTCTCCGATTCTAATAAACTTGGACAAGGTGGGTTCGGAGTTGTTTATCGGGGCAAGCTCCCTAATGGACAAATGATTGCGGTCAAAAGATTGTCCAAAGATTCTGACCAAGGAGATGTGGAATTTAAAAATGAAGTACTTTTAGTAGCCAAACTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTCAGTTTAGAAGGGAGAGAAAAACTGCTTATTTATGAATATGTTACAAATAAAAGTCTTGATTACTTCATATTCAATCCAGCCAGAAGAGCACAATTGAATTGGGAAAAGCGCTATGATATCATAAAATGTATTGTTCGAGGTCTTATTTATCTTCATGAGGATTCTCGCCTCCGCATTATACACCGTGATCTCAAAGCTAGCAATATTCTCTTAGACGACGGGATGAATCCTAAAATATCCGATTTTGGATTGGCGAGATTGTTTGTTATTGATCAAACTCAAGGAAATACAAGTAAAATTGTTGGAACCTAG 1488 0.3905 MALFPFLCYLFFIAAYHAKADDALCDNNIGNYTSNSTYDNNLKTLLSSLSSHTEINYGFYNFSYGEEPNKAYVIGVCRGDIEPNQCRTNLNNSIGYLREQCPNQKEAIVWGGDFTLWYSNRSIFGLLETSPTLYLYLQRNTSYVDQYMQAVANLMRNLTAKAALGDSRRKYEADSVFETTSFETIYGYVLCMPDLSSQQCTDCLNAAISEIPNCCNGKMGGNVLKPSCRLRYDPYRFFNSTIVLDSPPSTNNTSSGQSKTGTVIAVVVPVVTVVLVLILICIYLRLRKRKQFSKANNGAYEDGDEDEDEITIVESLQFNFDTIRVATSDFSDSNKLGQGGFGVVYRGKLPNGQMIAVKRLSKDSDQGDVEFKNEVLLVAKLQHRNLVRLLGFSLEGREKLLIYEYVTNKSLDYFIFNPARRAQLNWEKRYDIIKCIVRGLIYLHEDSRLRIIHRDLKASNILLDDGMNPKISDFGLARLFVIDQTQGNTSKIVGT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3981 495 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 3 495 - -
Mtr1g3981 495 Gene3D - 21 122 IPR038408 -
Mtr1g3981 495 Gene3D - 132 237 IPR038408 -
Mtr1g3981 495 SUPERFAMILY Protein kinase-like (PK-like) 312 495 IPR011009 -
Mtr1g3981 495 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Mtr1g3981 495 Gene3D Transferase(Phosphotransferase) domain 1 406 495 - -
Mtr1g3981 495 ProSiteProfiles Gnk2-homologous domain profile. 129 237 IPR002902 -
Mtr1g3981 495 Pfam Protein kinase domain 331 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3981 495 Gene3D Phosphorylase Kinase; domain 1 293 405 - -
Mtr1g3981 495 ProSiteProfiles Gnk2-homologous domain profile. 20 123 IPR002902 -
Mtr1g3981 495 ProSiteProfiles Protein kinase domain profile. 330 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3981 495 Pfam Salt stress response/antifungal 144 233 IPR002902 -
Mtr1g3981 495 Pfam Salt stress response/antifungal 25 120 IPR002902 -
Mtr1g3981 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Mtr1g3981 495 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 495 - -
Mtr1g3981 495 SMART serkin_6 330 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3981 Mtr-Chr1 51469452 51471952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3981 28 495 Receptor kinase-like Gene Family AT4G05200 45.885 4.79e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g3981 Pkinase 3.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3981 - - mtr:MTR_5g065130 631.328