Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3974 ATGACAACTGTTTCTAGCAAGCTATTATTTTCCTTTTATTCTGTTCTTTTTATTATCATTATCGTATCTCAAGCCCAAGGCCAACCAAATTTTTTGCGCAACTATTGTATAAACAATAATGGCAACTACACAGCCAATAGCACCTATCAAAACAACCTCAGCACCCTTTTGTCCAATCTAACTTCCAACACAGAAATCAACTACGGTTTCTACAATTTCTCTTATGGCCAAAACACTGACAAAGTAAACGCCGTTGGCCTCTGCAGAGGAGATGTTAAACCTGACGTTTGCCGAAGTTGTCTCAATGATTCAAGAGTTCTTCTCACAAAACTTTGTCCAAACCAAAAAGAAGCGATTGGTTGGTATGTTGACTGCATGTTGCGTTACTCAAACCGATCAATATTCGGCGTTATGGAAGCTTCACCTTCATATTTAAAGTGGACCTTGAAAAATGCAACCGAGGTGGATCAATTTAATCAAGTTCTTGGGAACTTGATGAGGAAACTCAAAGAAATAGCAGCATCAAGTGATTCTCGTCGTAAGTTTGCTACCGCTAATGCAACTTTGAATTTTGAAACCACATATGGTCTTGTGCAGTGTACACCTGATTTATCACAGCAAGATTGCAATGATTGTTTAGAGCGTGCTATTTCAGAAATTCCTATTTATTTTAATAACAAGGTTGGCGGTATAGTTCTCAAACCAAGTTGCAATATTAGACATGAAATCTATTCCTTCTATGATCCTACACCTGTAATAGACCCAGGTGAAACCTCCCCATCAGAAGAAGAAAAAAGCAAATCATCACATACTACCATCGCCATAGTTGTGCCGACTGTTGTGGTTGTTGTTGCTTCCCTGCTAATTTTCATTTGCATATGCGTAAGGAAAAGGAAGGCAAAGATAAATCTCGAAGATATAGAAGATGATAATAATGATATTGAAATCGCTGAGTCATTGCTATTCAACTTCGAGACATTACGAGTTGCTACAAGTAACTTTTCTGAAGCTAATAAACTTGGACATGGCGGATTTGGAATTGTTTATCAGGGTATACTCGCCGGTGGACAAGTGATTGCGATCAAAAGGTTGTCAACAAATTCAGGACAAGGGGATATTGAATTTAAGAATGAAGTGCTTTTAGTCGCTAAGCTTCAACATCGAAATTTAGTTCGACTACTTGGTTTTTGTCTAGAAGGAAGAGAAAGATTGCTTGTCTATGAATATGTTCCGAATAAAAGTCTTGATTATTTTATATTTGATCCAATAAAGAAAGCACAATTAGACTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTACCTTCATCAGGATTCTCAACTTCGTATTATACATCGTGATCTTAAAGCGGGTAACATTCTCTTAGACGAAAAATTGAATCCTAAAATATCAGATTTTGGTATCGCCAGACTACTTCTTGTCGATCAAACTCAAGTAAATACAAATAAAATCGTTGGAACATATGGATATATGGCTCCCGAGTATGTAATGTTTGGAGAATTTTCGATAAAATCAGACGTTTTTAGTTTTGGGGTGCTAGTTTTGGAGATTATAAGTGGCCAGAAAGCATGTCACGTTTTTCATGCACAGCGTTCGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGAGAGGGTACAATCACAAATATAATAGATCCATCATTAAGCAATGGTTCACGAAATGAAATAATGAGATGCATTCACATTGCTTTACTATGTGTTCAAGAAAATTTGGTTGAAAGACCAATCATGGCAACCGTTGTACTCATGCTTAGTAGTTATTATATCACTCTCGCTGTACCTTTGGAGCCTGCATCTATTGTGGGAGGCAGAAGTAGAAGCCTTCCAGTTCGAGACATGCAATTTGAGGGAGAATCAAGAAACCATGCTTCAATTACTGATCCATACCCTCGATAG 1956 0.3773 MTTVSSKLLFSFYSVLFIIIIVSQAQGQPNFLRNYCINNNGNYTANSTYQNNLSTLLSNLTSNTEINYGFYNFSYGQNTDKVNAVGLCRGDVKPDVCRSCLNDSRVLLTKLCPNQKEAIGWYVDCMLRYSNRSIFGVMEASPSYLKWTLKNATEVDQFNQVLGNLMRKLKEIAASSDSRRKFATANATLNFETTYGLVQCTPDLSQQDCNDCLERAISEIPIYFNNKVGGIVLKPSCNIRHEIYSFYDPTPVIDPGETSPSEEEKSKSSHTTIAIVVPTVVVVVASLLIFICICVRKRKAKINLEDIEDDNNDIEIAESLLFNFETLRVATSNFSEANKLGHGGFGIVYQGILAGGQVIAIKRLSTNSGQGDIEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEYVPNKSLDYFIFDPIKKAQLDWERRYKIIGGIARGLLYLHQDSQLRIIHRDLKAGNILLDEKLNPKISDFGIARLLLVDQTQVNTNKIVGTYGYMAPEYVMFGEFSIKSDVFSFGVLVLEIISGQKACHVFHAQRSEDLLSFAWRNWREGTITNIIDPSLSNGSRNEIMRCIHIALLCVQENLVERPIMATVVLMLSSYYITLAVPLEPASIVGGRSRSLPVRDMQFEGESRNHASITDPYPR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3974 651 SMART serkin_6 334 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3974 651 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Mtr1g3974 651 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 640 - -
Mtr1g3974 651 Coils Coil 297 317 - -
Mtr1g3974 651 Pfam Protein tyrosine and serine/threonine kinase 337 541 IPR001245 GO:0004672|GO:0006468
Mtr1g3974 651 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Mtr1g3974 651 Gene3D - 29 133 IPR038408 -
Mtr1g3974 651 Gene3D - 142 246 IPR038408 -
Mtr1g3974 651 CDD STKc_IRAK 340 604 - -
Mtr1g3974 651 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Mtr1g3974 651 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Mtr1g3974 651 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Mtr1g3974 651 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Mtr1g3974 651 SUPERFAMILY Protein kinase-like (PK-like) 318 604 IPR011009 -
Mtr1g3974 651 Gene3D Transferase(Phosphotransferase) domain 1 410 611 - -
Mtr1g3974 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Mtr1g3974 651 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3974 651 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3974 Mtr-Chr1 51401677 51405226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3974 12 621 Receptor kinase-like Gene Family AT4G21410 49.536 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g3974 PK_Tyr_Ser-Thr 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3974 - - gmx:100791056 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3974 1 51401677 51405226 Mtr1g3974 1 51401677 51405226 ECH