Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3973 ATGACAATTGTTTCTAGCAAGCTATTATTTTCCTTTTACTCTTTTCTCCTTTTTATTATCATTATCGTATCTCAAGCCCAGGGCCAACCAGATTTTGTGCGCTACTCTTGTTTAAACAATAATGGCAACTACACAGCCAATAGCACCTATCAAAACAACCTCAACACCCTTTTATCCAATCTCACTTCCAACACTCAAATCAACTACGGGTTCTACAATTTCTCTTATGGCCAAAACACCGACAAAGTAAACGCCATTGGACTCTGCAGAGGAGATGTTAAACCTGATGTTTGCCGCAGTCGTCTCAATGATTCAAGAGTTCTTCTCACAAAACTTTGTCCAAACCAAAAAGAAGCAATTGGTTGGTATGAGGACTACATGTTGCGTTACTCAAACCAATCAATATTTGGCATTCTTGAATGGTCACCAAAGTTTTATATGTCGAACCCGAACAATGTAACCGAGGTGGATCCATTTAATCGAGTTCTTGGAAACTTGATGAGGAAACTGAGAGAAATAGCTGCATCAAGTGATTCTCGTCTTAAGTTTGCTGCGGATAATGCAACTGATGTGAATTTGAATTTTCAAACCATATATGGTCTTGTGCAGTGTACACCTGATTTGTCAGAGCAAGATTGCAATGATTGTTTAGAGTTTGCTATATCAGAAATTCCAATTTACTGTTATAACAAGATTGGTTGTAGAGTTGTCAAACCAAGTTGTAATATTAGATATGAAGTCTATCGCTTCTCTGATCCTACAACAGTAATAAACCAAGATGAACACTCCCCATCAGAAGAAGAAAAAAGCAAATCATCACATACTACCGTCGCCATAGTTGTGCCAACTGCTGTTGTTGTTGCTGCCCTGCTAATTTTCATTTGCATATGCTTAAGGAAAAGGAAGGCAGCGACGATAAATCTTGGAGAAGAAAATGATAATGATGATATTGAAATCGCTGAGTCATTTCTATTCAACTTCGAGACATTACGAGTTGCTACAGGGAACTTTTCTGAAGCTAATAAACTTGGACATGGCGGATTTGGAGTTGTTTATCAGGGTATACTTGCCGGTGGACAAGTCATTGCAGTCAAAAGGTTGTCAACAAATTCAGGACAAGGGGATATTGAATTTAAGAATGAAGTGCTTTTAGTCGCTAAGCTTCAACATCGAAATTTAGTTAGACTACTTGGTTTTTGTCTAGAAGGAAGAGAAAGATTGCTTATCTATGAATTTGTTCCGAATAAAAGTCTTGATTATTTTATATTTGATCCAATAAAAAAAGCATGTTTGGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATAGCTAGAGGCCTTCTTTACCTTCATGAGGATTCTCAACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGATGAAAAGTTGAATCCTAAAATATCAGACTTTGGCATAGCCAGACTACTTCTTATCGATCAAACTCAAGTAAATACAAATAAAATCGTTGGAACATATGGATATATGGCTCCCGAGTATGTAAGGTTTGGAGAATTTTCGGTAAAATCAGATGTTTTTAGTTTTGGAGTATTAGTTTTGGAGATTATAAGTGGCCAGAAAGCTTGTCCCGTTCTTCGTGGGCGGAGTTCGGAGGATTTACTTGGCTTTGCATGGAGGAGTTGGAGGGAGGGTACAATCACAAATATAATAGATCCATCATTAAGCAATGGTTCACAAAATGAAATAATGAGATGCATTCACATTGCTTTACTATGTGTTCAAGAAAATTTGGTTGAAAGACCAACTATGGCAACCGTTGCACTCATGCTTAGTAGTTATTCTTTATCTCTCTCTGTACCTTTGGAGCCTGCATCTTTTGTGCTTGGCAGAACTAGAAGCCTTCCAGTTCGAGACATGCAATTTGAGGGAGAATCAAGAAACCATGCTTCAATTACTGACCCATACCCTCGATAG 1965 0.3781 MTIVSSKLLFSFYSFLLFIIIIVSQAQGQPDFVRYSCLNNNGNYTANSTYQNNLNTLLSNLTSNTQINYGFYNFSYGQNTDKVNAIGLCRGDVKPDVCRSRLNDSRVLLTKLCPNQKEAIGWYEDYMLRYSNQSIFGILEWSPKFYMSNPNNVTEVDPFNRVLGNLMRKLREIAASSDSRLKFAADNATDVNLNFQTIYGLVQCTPDLSEQDCNDCLEFAISEIPIYCYNKIGCRVVKPSCNIRYEVYRFSDPTTVINQDEHSPSEEEKSKSSHTTVAIVVPTAVVVAALLIFICICLRKRKAATINLGEENDNDDIEIAESFLFNFETLRVATGNFSEANKLGHGGFGVVYQGILAGGQVIAVKRLSTNSGQGDIEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPIKKACLDWERRYKIIGGIARGLLYLHEDSQLRIIHRDLKASNILLDEKLNPKISDFGIARLLLIDQTQVNTNKIVGTYGYMAPEYVRFGEFSVKSDVFSFGVLVLEIISGQKACPVLRGRSSEDLLGFAWRSWREGTITNIIDPSLSNGSQNEIMRCIHIALLCVQENLVERPTMATVALMLSSYSLSLSVPLEPASFVLGRTRSLPVRDMQFEGESRNHASITDPYPR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3973 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mtr1g3973 654 Pfam Protein kinase domain 338 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3973 654 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Mtr1g3973 654 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Mtr1g3973 654 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Mtr1g3973 654 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 643 - -
Mtr1g3973 654 CDD STKc_IRAK 343 604 - -
Mtr1g3973 654 Gene3D Phosphorylase Kinase; domain 1 301 412 - -
Mtr1g3973 654 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Mtr1g3973 654 Pfam Salt stress response/antifungal 151 247 IPR002902 -
Mtr1g3973 654 Gene3D - 143 250 IPR038408 -
Mtr1g3973 654 Gene3D - 31 134 IPR038408 -
Mtr1g3973 654 SMART serkin_6 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3973 654 ProSiteProfiles Protein kinase domain profile. 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3973 654 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 643 - -
Mtr1g3973 654 SUPERFAMILY Protein kinase-like (PK-like) 321 607 IPR011009 -
Mtr1g3973 654 Gene3D Transferase(Phosphotransferase) domain 1 413 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3973 Mtr-Chr1 51396882 51400371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3973 7 625 Receptor kinase-like Gene Family AT4G21410 50.840 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g3973 Pkinase 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3973 - - gmx:100791056 777.704