Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3967 ATGATTACCATATTAGTAAAAAAGAATCTTATAGTACAGTTTTTTCTTAGAACTCTTATACTTTCCATAACAGAAACATCTGCATCAGTGTTCAACAATGTTACCTGCACAACCAACCAAACATTCACACCAAACAGCACTTTTCACAAAAACCTTAACACTGTTCTGTTTTCACTTTCTTCCAACGTAACCAATGATGTTAGATTTTTCAACACAACATCAGGAAATGATTCAAACAAAGTCTATGGTCTCTATATGTGTCGTGGAGATGTTCCATTTGCTCTATGCAGAGAGTGTATTGGTTTTGCAACACAAAAAATTCCATCATCTTGTCCTTCTTCTAAAGAAGCTGTGATCTGGTACAACGAGTGTTTGTTAAGGTATTCCTACAGATTCATCTTCATGAAAATGGAAACATGGCCTAGATACAAGATCGAGATTCCAATGGGGGACCCTGTTTTGTTACAGAGTAAAAGATTTTACTCTGCTTTAAGATCTGTTTTGAATGTTCTTCCAAAAGAAGCTGCACTTTCTCTTGGTGGTTTTAACAAGTATGCTGTGAAGCAAGAAAATGCTTCTGCCAGTGTAACGCTATATGGTCTTGCTCAGTGCACACCGGACTTGTCAGCCGGAGATTGTAGGCGGTGTATTGAGGTTGCGGTGGTAGAATTTCCTAAGGATTGTTGTGGTGGTAGCATAGGGGAAACTGTTTTCTTTCCAAGTTGTTTTGTTAGGTTTGAAACTTATCCGTTTTATCAGCATTCAGAGACCTCAGCAGCAGCAACAACAACTAAGGGAGGGAGAAATATTCCAACCAATGTGGTTGCAATCATTGTTGTTTTGGTTGTCATTTTGGCCGTGATTTTGTCCACCGGCTGCTGTTTATTATTGATAAAAGCGAAGAAGAGACGCAGGGCCAGTCACAGAGAAAACTTTGTGCTTGAATTTAAAAACTCAGAGTCATTGGAATTTGATTTTGCTACAATTGAAATAGCAACAAACATGTTTTCTGAAGATAGCAAAATAGGCAGAGGGGGATATGGACAAGTCTACAAGGGAACTCTTCCTAGTGGACAAGAAATAGCTGTGAAGAGACTGTCCAAAACTTCTGGCCAAGGAGCAGAAGAATTCAAAAATGAGGTGATGTTAATTGCCAAACTTCAACACAGAAATTTAGTGAGGTTAATAGGATTTTGCCTTGAAGACCAAGAAAAGATACTCGTCTATGAATATGTGCCTAACAAAAGTCTTGATCACTTCCTATTTGATTCTCGGAAGCAAAAGCAATTAACTTGGCCTGAACGGTATAATATCATTAAAGGGATTGCTCGAGGAATTCTTTACCTTCATGAAGATTCTCGTCTCAAGATTATACACCGTGATATTAAACCAAGCAATGTTCTTCTAGATAACAATATGAATCCAAAAATCTCTGATTTTGGCATGGCAAGGATGGTAGCTATAGAACAAGTTCAAGGACATACAAATAGAGTTGTGGGCACATATGGTTACATGTCTCCGGAATATGCAATGCATGGACAATTTTCAGAGAAGTCTGATGTTTTTAGTTTTGGAGTGATGGTTCTCGAGATTATTAGTGGAAAAAAGAATTCATGTTCATTTGAATCACGTCGTATCGATGATCTCTTAAGTCACGCTTGGAATCAATGGAAAGATGAATCACCATTTCAGATGCTGGATCCAATTATGCAAGAATCTTATTCACCAAATGAAGTAGAAAAGTGTGTGCAAATTGGTTTACTTTGTGTCCAAGAAAATCCAGATGATAGGCCTACAATGGGAACTGTTGTTTCATATCTTAATAATGTCTCAATTGAAATGCCATTTCCCATGGAACCAGCATTTTTCATGCACGGCAGGACGAGAAGAAATTCAGGCCATTCAGCTGGACATGAATCATATTCAGGTCATTCCACCAACTATTCCCTCTCCTCCTCCAGTGTATGTCCTCGATATTACAGAATTTACCCTAAAAAAGTACTGGACAGAAATGATGGGGTGGAGACAAACCGTCCAATCTATCTGAGGAAATGTGCAAAAGACCGAAAGCTCGCCGATTTTGAAAACAGTCCACTTGGATTTGGAGAATCAAACTTAGATTTCACAAACAATAATATATACAACACTTCATCCCTTAACACAATAAACAGAGCCATGAATTACACTATGTCTTTGAATTCCTTCAACCTTCTATTTCTGTTCCTCTTCATTACCTTTCTCCTGAGCTCAAATACAAAAGCACAAAATCCTACTCATCTCTACCAGATTTGTTCAATGAACAAAACCACATCCAACAGCACCTACAAATCAAACATCATAACCCTTTTCTCTTATCTTTCTTCCAACGCCACCACAAACAATGAATTCTACAACACGGTCCCCAGCAGAAACATCTCAAACTCCGTATACGGTCTATTCATGTGCAGAGGCGACGTTTCATCTCCCCTCTGCATACAATGTGTGGCGAACGCAACACAGAGACTATCATCAGATGCAGACTGCTCCTTATCCAAACAAGCTGTAATCTGGTACGACGAGTGCATGGTTCGATATTCCAACACCTCTTTTTTCTCCACCATGGCTACAAGGCCTGGCGTTTTCATGATGAACAGCCTAAATATCACAAACCAGGAGACATTCATGCCTTTGTTGTTTGATACAATGAACAAAACAGCAGATAATGCTGCAAATTCTTCTGTTGGTGCTAAGAAATACGCAACAAAGGAAGCTAGCATCTCTGGTTTTCAGACACTTTATTGTATGGCTCAGTGTACAGAGGATTTATCACAGCAAGATTGCAGAACGTGTCTTAGTGATGCTATTGGAGCTCTTCCACAGTGTTGTGATGGAAAGCAAGGTGGGAGAGTTTTGTTTCCTAGCTGTAATGTTAGATATGAATTATACCCTTTTTATCGAAACCTTGCTCCTTCACCATCACCAGCGCCTTCAGCAGCACCAGCGCTTGTTCCTCCTTCAACCAGCACTCCTACTTTGGGAGGAAGTAGCGGGATCTCATCAGGGACAATTGTTGCAATTGTGGTTCCGATTTCTGTGGCCACACTGCTATTAATCGTTGGTGTTTGTTTCTTAAGTAAAAGAGCATGGAAGAAGAAGCATGACTCTGCAGCACAAGATCCTAAAACTGAAACTGATATTTCCACTGTGGAATCCTTGAGATTTGATTTGAGTACACTTGAAGAAGCTACAAACAAATTCTCAGAAGCTAATAAGCTAGGTGAAGGTGGATTTGGTGAGGTTTACAAGGGCTCACTTCCGAGCGGACAAGAAATAGCTGTCAAGAGACTCTCTAAACACTCGGGACAGGGCGGAGAACAATTTAAGAATGAAGTTGAGCTTGTTGCCCAACTTCAACATAGAAATTTAGCTAGGCTTCTAGGATTTTGCTTGGAAAGAGAAGAAAAGATACTTGTTTATGAATTTGTGGCCAACAAAAGCCTCGACTATATTCTTTTTGATCCTGAAAAACAAAGGCTGTTGGATTGGACAAGGCGTTACAAGATTATTGGAGGGATTGCGCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAAAATTATTCATCGTGATCTTAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCGGACTTTGGCATGGCAAAATTATTCGGAGTGGATCAAACTCAAGGAAATACCAGTAGAATCGTAGGCACATATGGTTACATGTCTCCGGAGTATGCAATGCATGGAGAGTTCTCGATAAAGTCTGATGTATACAGTTTTGGAGTCCTCGTTATGGAGATTATAAGTGGCAAGAAGAGCAACTCTTTCTATGAAACAGGTGTTGCTGATGATTTAGTAACCTATGCCTGGAAACTTTGGAAGAATGGAACACCCTTGGAATTGGTTGATCACACAGTAAGAGAGTCTTATACTCCAAATGAAGCTATCAGATGCATCCATATTGGTTTACTATGTGTCCAAGAAGATCCAGAAGATAGACCTACAATGGCAACAGTAGTGCTCATGCTAGATAGTTTCACTGTTACGCTACCGGTACCTAAGCAGCCTGCATTTTTTCTACACAGTGGAACTGATTCAAACATGCCGACAATACAAATTAGTCAATCTACTACCAATTGA 4161 0.3956 MITILVKKNLIVQFFLRTLILSITETSASVFNNVTCTTNQTFTPNSTFHKNLNTVLFSLSSNVTNDVRFFNTTSGNDSNKVYGLYMCRGDVPFALCRECIGFATQKIPSSCPSSKEAVIWYNECLLRYSYRFIFMKMETWPRYKIEIPMGDPVLLQSKRFYSALRSVLNVLPKEAALSLGGFNKYAVKQENASASVTLYGLAQCTPDLSAGDCRRCIEVAVVEFPKDCCGGSIGETVFFPSCFVRFETYPFYQHSETSAAATTTKGGRNIPTNVVAIIVVLVVILAVILSTGCCLLLIKAKKRRRASHRENFVLEFKNSESLEFDFATIEIATNMFSEDSKIGRGGYGQVYKGTLPSGQEIAVKRLSKTSGQGAEEFKNEVMLIAKLQHRNLVRLIGFCLEDQEKILVYEYVPNKSLDHFLFDSRKQKQLTWPERYNIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNNMNPKISDFGMARMVAIEQVQGHTNRVVGTYGYMSPEYAMHGQFSEKSDVFSFGVMVLEIISGKKNSCSFESRRIDDLLSHAWNQWKDESPFQMLDPIMQESYSPNEVEKCVQIGLLCVQENPDDRPTMGTVVSYLNNVSIEMPFPMEPAFFMHGRTRRNSGHSAGHESYSGHSTNYSLSSSSVCPRYYRIYPKKVLDRNDGVETNRPIYLRKCAKDRKLADFENSPLGFGESNLDFTNNNIYNTSSLNTINRAMNYTMSLNSFNLLFLFLFITFLLSSNTKAQNPTHLYQICSMNKTTSNSTYKSNIITLFSYLSSNATTNNEFYNTVPSRNISNSVYGLFMCRGDVSSPLCIQCVANATQRLSSDADCSLSKQAVIWYDECMVRYSNTSFFSTMATRPGVFMMNSLNITNQETFMPLLFDTMNKTADNAANSSVGAKKYATKEASISGFQTLYCMAQCTEDLSQQDCRTCLSDAIGALPQCCDGKQGGRVLFPSCNVRYELYPFYRNLAPSPSPAPSAAPALVPPSTSTPTLGGSSGISSGTIVAIVVPISVATLLLIVGVCFLSKRAWKKKHDSAAQDPKTETDISTVESLRFDLSTLEEATNKFSEANKLGEGGFGEVYKGSLPSGQEIAVKRLSKHSGQGGEQFKNEVELVAQLQHRNLARLLGFCLEREEKILVYEFVANKSLDYILFDPEKQRLLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKASNILLDGDMNPKISDFGMAKLFGVDQTQGNTSRIVGTYGYMSPEYAMHGEFSIKSDVYSFGVLVMEIISGKKSNSFYETGVADDLVTYAWKLWKNGTPLELVDHTVRESYTPNEAIRCIHIGLLCVQEDPEDRPTMATVVLMLDSFTVTLPVPKQPAFFLHSGTDSNMPTIQISQSTTN* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3967 1386 SUPERFAMILY Protein kinase-like (PK-like) 321 631 IPR011009 -
Mtr1g3967 1386 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3967 1386 SMART serkin_6 1079 1354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3967 1386 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Mtr1g3967 1386 ProSiteProfiles Gnk2-homologous domain profile. 757 863 IPR002902 -
Mtr1g3967 1386 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3967 1386 ProSiteProfiles Protein kinase domain profile. 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3967 1386 ProSiteProfiles Gnk2-homologous domain profile. 869 977 IPR002902 -
Mtr1g3967 1386 ProSitePatterns Protein kinases ATP-binding region signature. 1085 1107 IPR017441 GO:0005524
Mtr1g3967 1386 Gene3D Phosphorylase Kinase; domain 1 1039 1154 - -
Mtr1g3967 1386 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Mtr1g3967 1386 CDD STKc_IRAK 1085 1351 - -
Mtr1g3967 1386 CDD STKc_IRAK 342 609 - -
Mtr1g3967 1386 Pfam Protein tyrosine and serine/threonine kinase 1082 1348 IPR001245 GO:0004672|GO:0006468
Mtr1g3967 1386 ProSiteProfiles Protein kinase domain profile. 1079 1354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3967 1386 Gene3D Transferase(Phosphotransferase) domain 1 1155 1357 - -
Mtr1g3967 1386 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Mtr1g3967 1386 SUPERFAMILY Protein kinase-like (PK-like) 1064 1372 IPR011009 -
Mtr1g3967 1386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Mtr1g3967 1386 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 641 - -
Mtr1g3967 1386 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 731 1377 - -
Mtr1g3967 1386 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Mtr1g3967 1386 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Mtr1g3967 1386 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Mtr1g3967 1386 Pfam Salt stress response/antifungal 880 975 IPR002902 -
Mtr1g3967 1386 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Mtr1g3967 1386 Pfam Salt stress response/antifungal 764 860 IPR002902 -
Mtr1g3967 1386 Gene3D - 756 863 IPR038408 -
Mtr1g3967 1386 Gene3D - 29 132 IPR038408 -
Mtr1g3967 1386 Gene3D - 872 977 IPR038408 -
Mtr1g3967 1386 Gene3D - 154 251 IPR038408 -
Mtr1g3967 1386 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 8 641 - -
Mtr1g3967 1386 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 731 1377 - -
Mtr1g3967 1386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1200 1212 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3967 Mtr-Chr1 51306598 51319436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3967 15 661 Receptor kinase-like Gene Family AT4G05200 43.731 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g3967 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3967 - - pavi:110754814 1241.48