Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3945 ATGCAAGACTTCTTCGGCTCAATTCGCCGATCCATTGTCTTCTCAACCCCGCCCTCCGCCGACGATGCACGCTTCTCCGGTTTCGCCAACAAGATCGGCTCCGCCATTCGCAAATCCAGAATCGGCAGCCTCAAATCTCCTCCTCCACCTCCGCCAATTCGGTGGCGTAAAGGCGAGCTGATTGGTTCCGGTGCCTTTGGGAGGGTCTACATGGGCATGAACCTTGATTCCGGAGAGCTTATTGCCGTTAAACAGGTTTTGATTGAGCCTGGTATTGCCTTCAAAGAGAATACAAAGGCTAATATCCGGGAGCTCGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCAAGAGAGGAAGATTCCTTAAATATTTTGTTGGAGTTTGTACCTGGTGGATCTATCTCATCACTATTGGGGAAATTCGGATCCTTCCCTGAGTCGGTTATCAGAACGTATACAAAACAGCTTTTAGATGGTCTTGAATACCTTCACAATAACCGAATTATTCACAGGGATATCAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGTATTAAACTCGCAGACTTTGGTGCATCCAGAAAAGTAGTGGAATTGGCTACCATAAATGGAGCAAAGTCTATGAAGGGTACCCCACACTGGATGTCACCTGAAGTTATTTTACAGACAGGATATACAACCTCTGCTGATATATGGAGTGTTGCTTGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGAGGTTTCGGCTCTTTTCTACATTGGAACAACTAGAGATCATCCACCCATACCTGAACATCTGTCTACTGAGGCAAAGGACTTTTTGCTCAAATGCTTTCACAAGGAACCAAATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCGTTCATCACCTGCGAGTATCGGGAATCTCGTTCAATATCACGCAGTTCAATCAGGGACTCTTGCAATCAGATGGTACCAAATGGGCTGAACACTAGAAACTTTTTGGATTCTATCCAAGGATCAACTAGCACAGGCCTAAAGGATGTTTGTCAGACGGATAGTTTAAGGTTCTCGACTGTATATCATTCAAATTCCAATTCAAATCTTTTAAAAGCAGGTTCCTACCAGGGAGCAGACAACGATGATGATGACATGTGTCTAATAGATGATAAAGATGATTTTTTGGTTGATTCATCAGTAAAATCTAAATCCCTACTCGCTGCTGACGACATAAAGAGTTTCAATCCAATGTCCGAGCCTCTGGAGGATGACTGGCCTTGCAAGTTTGATGAAACTCTGAATTTGAAGAAAAGCAGACTGAACTTGTCCCCAGATCAAACTACTATGAAAACTATGAGTCCCGCACCATCTCCTAATGCAGAGAATGAGTTCTCATTTTCAAGTGAACCTCTTGCGGTTGAAGATGATGATGAAGTCACAGAGTCCAAAATTAGAGCTTTCCTGGATGATAAGGCCTTTGAATTGGAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTGGCAAATCAAATGCAACCATTCCTCCTGCGCCTTTTGCAGTTGCTCAAAGTAAAGTTATTTCTGATGCCTCAAATGTAACATCAAAAAGCAGGTCTCCAAGTCAAACTAGACGACGATTCTCAATGGCTAGCATCGCCAATGTAACAAGCCCGGAGAGTCATAGAAAATATCTTACAAAACTTAGTGGCACGACTTCTCATTGTAGACCTTTGCGGGAAGTTCAGCCATCCAAGCTCAATGAATCAAAGGAGACTCTTCATGATGCTGAGCTGGGATCAAGTGTTAACTCAAGCTTCTCTGAGATACAAAGGAAATGGAAAGAAGAACTTACCGAAGAGCTCGAGCGGACGCGAGAGGTGATGCGTCAAACAGGTGGAGGGAAGATAACGTCCCCAAAGGATCGCAATTTTCTTAGAGACTAA 1992 0.4357 MQDFFGSIRRSIVFSTPPSADDARFSGFANKIGSAIRKSRIGSLKSPPPPPPIRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIEPGIAFKENTKANIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIRTYTKQLLDGLEYLHNNRIIHRDIKGANILVDNKGCIKLADFGASRKVVELATINGAKSMKGTPHWMSPEVILQTGYTTSADIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTRDHPPIPEHLSTEAKDFLLKCFHKEPNLRPSASDLLLHPFITCEYRESRSISRSSIRDSCNQMVPNGLNTRNFLDSIQGSTSTGLKDVCQTDSLRFSTVYHSNSNSNLLKAGSYQGADNDDDDMCLIDDKDDFLVDSSVKSKSLLAADDIKSFNPMSEPLEDDWPCKFDETLNLKKSRLNLSPDQTTMKTMSPAPSPNAENEFSFSSEPLAVEDDDEVTESKIRAFLDDKAFELEKLQTPLYEEFFGKSNATIPPAPFAVAQSKVISDASNVTSKSRSPSQTRRRFSMASIANVTSPESHRKYLTKLSGTTSHCRPLREVQPSKLNESKETLHDAELGSSVNSSFSEIQRKWKEELTEELERTREVMRQTGGGKITSPKDRNFLRD* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3945 663 ProSiteProfiles Protein kinase domain profile. 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3945 663 MobiDBLite consensus disorder prediction 461 480 - -
Mtr1g3945 663 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 38 561 - -
Mtr1g3945 663 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Mtr1g3945 663 PANTHER MAP KINASE KINASE KINASE 38 561 - -
Mtr1g3945 663 SMART serkin_6 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3945 663 Gene3D Transferase(Phosphotransferase) domain 1 54 346 - -
Mtr1g3945 663 SUPERFAMILY Protein kinase-like (PK-like) 54 319 IPR011009 -
Mtr1g3945 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Mtr1g3945 663 CDD STKc_MAPKKK 54 318 - -
Mtr1g3945 663 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3945 663 MobiDBLite consensus disorder prediction 641 663 - -
Mtr1g3945 663 Coils Coil 95 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3945 Mtr-Chr1 51085927 51092182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3945 1 653 MAP Kinase Kinase Kinase AT3G06030 54.328 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr1g3945 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3945 - K20606 gmx:100795863 889.412