Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3939 ATGGCTTCTTCAACCAAAGAGATAGACAGAGAACTTCCACCTCTTCTCCGTGTCTACAAAGATGGAACAGTTGAACGTTTCTTAGGCTCTAAAATCGTACCACCAATCCCTCTTGATCCTGAAACAGGTGTCTCATCAAAAGACATAACCTTTTCACAAAACCCATTAATCTCTGCACGTATTCATCTTCCAAAACTCACCAACCAAACTCAAAAGCTTCCAATCTTAGTTTACTATCATGGTGGTGCTTTTTGTCTTGAATCAGCTTTCTCTTTTCTTCACCAACGTTACCTTAACATCATTGCTTCACAAGCAAATGTTCTTGTTGTTTCTGTTGAATATAGACTTGCACCAGAACACCCTCTTCCTGCTGCATATGATGATGGTTGGTTTTCTCTCAAATGGATCACTTCTCATTCCATCAACAACATCAATAACGCTGAACCATGGTTAATCAAATACGGTGATTTTGACCGTTTTTACATTGGTGGTGATACTTCAGGTGCAAATATTGCACATAATGCACTTCTTCGTGTTGGTAATGGTGTTGAAACTTTACCTGGTGATGTGAAAATTAGAGGAGCATTACTTGCTTTTCCTTTGTTTTGGAGTTCGAAGCCGGTTTTGTCAGAATCAGTTGAAGGGCATGAACAAAGTTCACCTATGAAAGTATGGAATTTTGTGTATCCTGATGCACCTGGTGGGATTGATAACCCTTTGATCAATCCTTTGGCTATTGATGCTCCAAGTTTGGATATTATTGGTTGTCCTAAGATATTGATTTTTGTTGCTGGGAATGATGATTTAAGAGACAGAGGGATTTGGTACTATGATGCTGTTAAGAAAAGTGGTTGGAAAGGTGATGTGGAACTTGTTCATGTTGAAGGTGAAGAACATTGTTTTCAGATTTATCATCCTGAAACTCAGAGTTCTATTGATATGGTCAAACGTATTGCTTCTTTTCTTGTTTGA 972 0.3837 MASSTKEIDRELPPLLRVYKDGTVERFLGSKIVPPIPLDPETGVSSKDITFSQNPLISARIHLPKLTNQTQKLPILVYYHGGAFCLESAFSFLHQRYLNIIASQANVLVVSVEYRLAPEHPLPAAYDDGWFSLKWITSHSINNINNAEPWLIKYGDFDRFYIGGDTSGANIAHNALLRVGNGVETLPGDVKIRGALLAFPLFWSSKPVLSESVEGHEQSSPMKVWNFVYPDAPGGIDNPLINPLAIDAPSLDIIGCPKILIFVAGNDDLRDRGIWYYDAVKKSGWKGDVELVHVEGEEHCFQIYHPETQSSIDMVKRIASFLV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3939 323 Pfam alpha/beta hydrolase fold 76 302 IPR013094 GO:0016787
Mtr1g3939 323 Gene3D alpha/beta hydrolase 11 323 IPR029058 -
Mtr1g3939 323 SUPERFAMILY alpha/beta-Hydrolases 14 322 IPR029058 -
Mtr1g3939 323 PANTHER ARYLACETAMIDE DEACETYLASE 4 322 - -
Mtr1g3939 323 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3939 Mtr-Chr1 50998970 51000232 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3939 7 322 Carbohydrate Esterase AT3G48700 37.117 5.20e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3939 - K13258 gmx:100785409 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0066 5 667008 668282 Mtr1g3939 1 50998970 51000232 PCT