Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3932 ATGATCCATCAAAAACAAATGCTGCACCACTTCAAATTCTCTACCACTGTCTATGTTTTCTTTTGCTTCACACTAATTATAACCATAATAACAACTCAAGCAGCTACAGACCTATCCTTCATCCAGAGTTACTGTCCAAACACAAACACTTTTTCTTCAAACACAACCTACCAAACAAACCTCAACAAACTTCTTTCTATTCTTTCATCCAACTCCACAAACAAAAATGGTTTCTACTACACCACAGTTGGCGCCAACAACCCCGTAAACACCGTGTACGGTGCCTTTCTCTGCCGTGGAGATCGCACACAAAAAGAATGCAAAGACTGTGTTTCTGCAGCATCCAATCAAATCCCTCAAAAATGTCCTAAAGCAAAAGAATCAGTTATTTGGTTAGCTGAATGCATGATACGTTACTCAAACGTTTCATTCTTCAACGTAGCTGCAGAAGTTCCAGTGCTTGCGCTCATGAACACTGGAACTGTGATGGAGCAGAACCGGTTCATGCAACTTTTAGCGGATACAATGAACGCTGCCGCGGTAGAGGCGGTGAATGGTGGAGGTGACAAGAAGTTTGGAACAAAAGTGGCAAATTTTTCTAGTTTTCAAACATTGTATACACTTGCACAGTGTACACCGGATTTGTCAAATTCAGGATGCGAAAAGTGCCTCAAAATAGCAACTAATTATATACCATCTTGCTGTAGTGGAAAACAAGGAGCAAGAGTTCTTATTCCTAGTTGTAATATTAGGTATGAGTTGTATCCATTTTATCATGAGTTGAATGTGCCTGCTCCAGATGAACCGAGGCCAAATCCACAAGGAAAAAAATCACGGAACTCAGTAGTGTTAATTGTTGCTATAGTAGCTCCTATTGTGATCATTTTGTTGCTTACATTGTTTGTCTGCTGGATCATATCTAAAATGAAAAGAATAAAGTTCAACTCAGTGCCTCAAGAAAGTGTTGAAATCTCCAGGGTAGAATTCTTGCAATTTGATTTCGATACCATCGCAACGGCCACAAACAACTTCAGTGGTGACAATAAATTAGGGGAAGGAGGATTTGGCGAGGTTTACAAGGGTATGCTGTTTAATGGACAAGAGATTGCTGTGAAGAGGCTATCAAGAAGTTCTGGTCAAGGCATAGAAGAATTCAAGAATGAGGTCGTTTTGGTAGCCAAACTACAACACAGAAATCTTGTTAGGATTCTTGGGTTTTGCTTGGATGGTGAAGAAAAGATGCTCATTTATGAATTCATGCCCAACAAAAGTCTAGACTATTTTCTATTTGATCCTGAAAAAGCACATCAGATAAATTGGCCAAGACGATACAAGATAATAGAAGGAATTGCCCGTGGAATGCTTTATCTTCACGAAGATTCTCGACTTAGAATCATACATCGCGATCTTAAAGCTAGTAATATATTATTAGATGAGAATTTAAATCCCAAAATTTCAGATTTTGGGATGGCAAGAATATTTGGTGTTGATCAAACTCGAGGAATCACAAACAGAGTTGTTGGAACATTGGGTTACATGTCTCCAGAGTATGCAATGCACGGAGAATTTTCTATCAAAACAGATGTGTATAGCTTTGGTGTCCTCGTTCTCGAGATAATTACCGGAAAGAAGATCACATCCTTTCGCGAATCAGGCTACGCCGAGGACCTTTTGAGCTATGCTTGGAAAAAATGGAATGATGGGACACCATTAGAGTTACTGGACATGACATTGAGAGATTCATACACAAGTGTTGAAGTAACAAGATGCATCCATGTTGGGTTATGTTGTGTTCAAGAAGATCCAGATCAAAGACCATCGATGCAGACAGTAGTTTTACTGCTAAGTAGCCATTCTGTTACTCTTGAACCACCTCAACGACCAGCGGGTTATATTAGTAGCAAAACTGATCAAAGCTTTGCAACAAAAGATTTTGATAGCTCAGACAAGTCTACATCTAAAAGCCAATCGGTTGCAGTTTCTGTTGATGATGCATCCATCACTCAGGTGTACCCTCGATAG 2022 0.3961 MIHQKQMLHHFKFSTTVYVFFCFTLIITIITTQAATDLSFIQSYCPNTNTFSSNTTYQTNLNKLLSILSSNSTNKNGFYYTTVGANNPVNTVYGAFLCRGDRTQKECKDCVSAASNQIPQKCPKAKESVIWLAECMIRYSNVSFFNVAAEVPVLALMNTGTVMEQNRFMQLLADTMNAAAVEAVNGGGDKKFGTKVANFSSFQTLYTLAQCTPDLSNSGCEKCLKIATNYIPSCCSGKQGARVLIPSCNIRYELYPFYHELNVPAPDEPRPNPQGKKSRNSVVLIVAIVAPIVIILLLTLFVCWIISKMKRIKFNSVPQESVEISRVEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGMLFNGQEIAVKRLSRSSGQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEFMPNKSLDYFLFDPEKAHQINWPRRYKIIEGIARGMLYLHEDSRLRIIHRDLKASNILLDENLNPKISDFGMARIFGVDQTRGITNRVVGTLGYMSPEYAMHGEFSIKTDVYSFGVLVLEIITGKKITSFRESGYAEDLLSYAWKKWNDGTPLELLDMTLRDSYTSVEVTRCIHVGLCCVQEDPDQRPSMQTVVLLLSSHSVTLEPPQRPAGYISSKTDQSFATKDFDSSDKSTSKSQSVAVSVDDASITQVYPR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3932 673 MobiDBLite consensus disorder prediction 643 673 - -
Mtr1g3932 673 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 672 - -
Mtr1g3932 673 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Mtr1g3932 673 SUPERFAMILY Protein kinase-like (PK-like) 321 615 IPR011009 -
Mtr1g3932 673 SMART serkin_6 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3932 673 ProSiteProfiles Gnk2-homologous domain profile. 150 257 IPR002902 -
Mtr1g3932 673 Pfam Salt stress response/antifungal 165 255 IPR002902 -
Mtr1g3932 673 Pfam Salt stress response/antifungal 45 141 IPR002902 -
Mtr1g3932 673 ProSiteProfiles Protein kinase domain profile. 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3932 673 Gene3D Phosphorylase Kinase; domain 1 305 419 - -
Mtr1g3932 673 Gene3D - 151 257 IPR038408 -
Mtr1g3932 673 Gene3D - 37 144 IPR038408 -
Mtr1g3932 673 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 17 672 - -
Mtr1g3932 673 ProSiteProfiles Gnk2-homologous domain profile. 39 144 IPR002902 -
Mtr1g3932 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mtr1g3932 673 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Mtr1g3932 673 Gene3D Transferase(Phosphotransferase) domain 1 420 624 - -
Mtr1g3932 673 CDD STKc_IRAK 350 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3932 Mtr-Chr1 50951623 50955376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3932 11 673 Receptor kinase-like Gene Family AT4G05200 50.294 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g3932 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3932 - - cit:102622618 735.717