Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3897 ATGGACTTTCCAAACTCTATGTTCCTCATTGTCTTAACATGTGTCACCATCATTGTTTTTCTTCGTTCATTCTTTGCAAGGATCACAAAACCAAACTATAAGCTTCCACCAGGACCTTCCCCTCTTCCAATCATAGGGAACCTCCTTGAATTAGGAGAAAAACCTCACAAATCCTTAGCCAATCTTACAAAGATTCATGGTTCTATAATAAGTCTCAAGTTTGGCCGAATAACCACTGTCGTCGTCTCCTCAGCCAACATGGCAAAGGAGGTGCTTCTGACCAATGACCAGTTCTTGTCTAATAGAACCATTCCACAATCTGTGTCGGTTCTCAACCACGAGCATTATAGTCTTGCTTTCATACCAGTTGCACCTCTTTGGAAGGAATTGAGAAAAATATGCAACACTCAATTATTTTCTCACAAGACTCTTGATGCTAGTCAAGATGTTAGACGCAAGAAAATGCAACAGCTTCTCAATGATATCAATCAAAGCAGTCAAATCGGTGAAGCAATAGATATCGGAACAGCAGTTTTCAAGACCACCATAAATCTGTTGTCAAACACAATTTTCTCTGTGGATTTGATTCAGTCTAATGGTGAAGCAGGAGAGTTCAAGGACTTGGTGACTAATATTACAAAACTCGTTGGCTCGCCAAATGTGGCAGATTTTTTTCCTATATTGAAGATGCTTGACCCACAAGGCGTAAAAAGAAAACAAGCAAAGAATGTAAGGAAAGTGTTAGATATCTTTGAAGACTTGGTTAACCAACGTTTGAAGGTGAGGGAAGCCAACGGTGTAGACACCAACAAAGACATGTTAGATGCCATGCTCAACATTTCCAAAGATAACGAGTTTATGGACAAAAACATGATCCAACATCTATCACATGATCTATTTGTTGCGGGAACAGATACAACAGCATCCACCCTCGAATGGGCGATGACAGAGCTTATCCGCAACCCAGAAGCTATGTTGAAGGCCAAAAAAGAGTTAGGGAAAATGATTGGTTGTAGTGTCCCACTTGAGGAGTCAGATATTTCAAAGCTCCCATACTTACAGGCAATAATAAAAGAGACACTTCGATTGCACCCGCCAGTGCCACTTTTACTACCACGGAAAGCTGAGAGGAATGTTGACATAGGTGGCTACACTATCCCGAAGGATGCACAGGTGATGGTTAATGTGTGGACTATTGGGAGAGATCCCACTATTTGGTTGAATCCAACTTTGTTCTCCCCAGAAAGGTTCTTGGGATCAGACATTGATGTCAAAGGCCGGAATTTTGAGCTTGTACCATTTGGTGCTGGACGACGAATATGCCCTGGCTTACAATTGGCTAATAGGATGCTGCTGTTAATGTTGGGGTCGTTAGTCAACTCGTTTGATTGGAAGCTTGAAGGTGACATGAAACCAGAAGATATGGACATGAATGATAAATTCGGCATTACCTTGCAAAAGGCACAACCCCTTCGAGTTGTTCCTGTCCGAATAAGCAAATAA 1503 0.4158 MDFPNSMFLIVLTCVTIIVFLRSFFARITKPNYKLPPGPSPLPIIGNLLELGEKPHKSLANLTKIHGSIISLKFGRITTVVVSSANMAKEVLLTNDQFLSNRTIPQSVSVLNHEHYSLAFIPVAPLWKELRKICNTQLFSHKTLDASQDVRRKKMQQLLNDINQSSQIGEAIDIGTAVFKTTINLLSNTIFSVDLIQSNGEAGEFKDLVTNITKLVGSPNVADFFPILKMLDPQGVKRKQAKNVRKVLDIFEDLVNQRLKVREANGVDTNKDMLDAMLNISKDNEFMDKNMIQHLSHDLFVAGTDTTASTLEWAMTELIRNPEAMLKAKKELGKMIGCSVPLEESDISKLPYLQAIIKETLRLHPPVPLLLPRKAERNVDIGGYTIPKDAQVMVNVWTIGRDPTIWLNPTLFSPERFLGSDIDVKGRNFELVPFGAGRRICPGLQLANRMLLLMLGSLVNSFDWKLEGDMKPEDMDMNDKFGITLQKAQPLRVVPVRISK* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3897 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Mtr1g3897 500 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3897 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
Mtr1g3897 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3897 Mtr-Chr1 50604859 50606796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3897 1 497 Cytochrome P450 AT2G45550 45.257 1.60e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3897 - - gmx:100807367 741.88