Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3894 ATGCCAAGACTATTCTCTAAACAGCTACACCTTTGTTTCTTCAAGCTCAAATACCCTACAATTCTCTCCCAACCTCACCCACAACACACTTCCACTCCATCACCACCTTGCCCTTTCCATTTCAACACCACCTTCAGCCACCACCACGAAGAAGAAGAAGAAGAAGACTATTTCTACGACACCACGGAGCTTCCACCACCTGACTTTTCTTCCGTCTTCGCCTCCCAACGGTTCTTCTTCTCCTCCCCAGGCAGCTCCAATTCCATCACAGAGTCTCCCTCCAACGACACTCTACCCTGTAATAACTCGTTGATACCAAGAGGAGGTAGTGTGAAGAGGGTGCCAAAATATTCTGTAAACCCTTACGTTGATTTCCTCCGTTCTATGCAGGAAATGATTCAATCTCAACAACAAGTGGTGGATGTTACTAACGATTGGGATTATCTTCATGAACTTCTCTTATGCTATCTTGCTCTTAATCCTACACATACTCACAAGTATATTGTTCAAGCTTTCACTCACCTTCTTGTTGATATTTTATCTTCCTCCTCCTCTTTATCATTCTCCTCCTCTTCATCTCCGCCATCACCTCCGAAGCTCAATAACCAACGCCACATCGCCACAGTAGTTTCTCCAGGAGGTTGGTGTAAAAATATTAAATGCCAAGGTTTTAAATAA 678 0.4381 MPRLFSKQLHLCFFKLKYPTILSQPHPQHTSTPSPPCPFHFNTTFSHHHEEEEEEDYFYDTTELPPPDFSSVFASQRFFFSSPGSSNSITESPSNDTLPCNNSLIPRGGSVKRVPKYSVNPYVDFLRSMQEMIQSQQQVVDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDILSSSSSLSFSSSSSPPSPPKLNNQRHIATVVSPGGWCKNIKCQGFK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3894 225 PANTHER TRANSCRIPTION REPRESSOR OFP12 1 185 - -
Mtr1g3894 225 ProSiteProfiles OVATE domain profile. 114 178 IPR006458 -
Mtr1g3894 225 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 185 IPR038933 GO:0045892
Mtr1g3894 225 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 116 180 IPR006458 -
Mtr1g3894 225 Pfam Transcriptional repressor, ovate 118 179 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3894 Mtr-Chr1 50585001 50586447 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr1g3894 Ovate 4.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3894 - - mtr:MTR_1g103640 384.03