Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3876 ATGCAATCAAGATCTATGGATCTTGGTCCCCCTAAGATGGGATCGGATGGTGGAGCAAGTTCAAAGATTAACCGTAGTGGAAATCTAAGCAGTAAAGATATGATTTTCAGAGCTGATAGAATTGATCTGAAGAACTTGGATGCTGATCTAGAAAGGCACATGAGCAGGGTTTTTTCTAGAAGTATTGAGGCAAGTAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCTAAATTGGAAATACGATATGTTGTTGCAAATGGGGCTTATGGCACTGTCTACAGGGGAACTTATGACAACCAAGATGTTGCTGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTGCCACTGCTGCTGAAACTGCTGCTTTACGAGCATCATTTCGGCAGGAGGTTACTGTGTGGCAAAAACTTGATCATTCAAATGTCACAAAATTTATTGGAGCTTCAATGGGGACTTCAAATCTTAAGATTCCTTCAGATGCTGGTGGTCAAAACCCCCTTCCTTCCAAGGCGTGCTGCGTTATTGTTGAGTTTGTTCATGGTGGGACATTGAAACAATTCTTAATGAAAAACAGGCGATCGAAACTTGCATACAGGGTTGTGATTCAGTTGGCTTTGGACCTCGCAAGAGGTCTTTGTTATCTACATTCGCAGAAAATTGTTCACCGCGATGTAAAAACTGATAACATGTTGCTAGACGAGAATCTAAATTTGAAAATAGCTGATTTTGGAGTTGCTAGGGTTGAAGCGGTAAATCCAAGTGAAATGACGGGCAGTACTGGAACCGTTGGGTATATGGCACCAGAGGTTATATGTGGTAAGCCTTACAACAGAAGCTGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTACTGCTGCGACATGCCTTATATGAATCTAAGCTTTGCTGATGCGTCAGCTGCGGTTGCTGATAAGAATTTGAGACCAGAGATTCCTAGATGCTGTCCAAGTGCATTAGCAGATATAATGAAAAGATGCTGGGACAAGAATCCAGAAAAGCGTCCGGAAATGAAAGATGTGGTGACAATGTTGGAAAAAATTGATACAAGCAAAGGAGGCGGAATGATAAGAGAAGACCAGACTCCATTTTGTTTTTGTTTTAAACCTGCTCGTGGCCCATAA 1149 0.4221 MQSRSMDLGPPKMGSDGGASSKINRSGNLSSKDMIFRADRIDLKNLDADLERHMSRVFSRSIEASRPKEEWEIDLAKLEIRYVVANGAYGTVYRGTYDNQDVAVKVLDWGEDGVATAAETAALRASFRQEVTVWQKLDHSNVTKFIGASMGTSNLKIPSDAGGQNPLPSKACCVIVEFVHGGTLKQFLMKNRRSKLAYRVVIQLALDLARGLCYLHSQKIVHRDVKTDNMLLDENLNLKIADFGVARVEAVNPSEMTGSTGTVGYMAPEVICGKPYNRSCDVYSFGICLWEIYCCDMPYMNLSFADASAAVADKNLRPEIPRCCPSALADIMKRCWDKNPEKRPEMKDVVTMLEKIDTSKGGGMIREDQTPFCFCFKPARGP* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3876 382 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3876 382 Gene3D Transferase(Phosphotransferase) domain 1 181 369 - -
Mtr1g3876 382 CDD STKc_MAP3K-like 87 353 - -
Mtr1g3876 382 SMART serkin_6 78 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3876 382 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672|GO:0006468
Mtr1g3876 382 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Mtr1g3876 382 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Mtr1g3876 382 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672|GO:0006468
Mtr1g3876 382 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Mtr1g3876 382 SUPERFAMILY Protein kinase-like (PK-like) 60 353 IPR011009 -
Mtr1g3876 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 375 - -
Mtr1g3876 382 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g3876 382 Pfam Protein tyrosine and serine/threonine kinase 80 353 IPR001245 GO:0004672|GO:0006468
Mtr1g3876 382 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 14 375 - -
Mtr1g3876 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3876 Mtr-Chr1 50395330 50399177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3876 27 382 MAP Kinase Kinase Kinase AT3G22750 75.070 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr1g3876 PK_Tyr_Ser-Thr 1.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3876 - - gmx:100803917 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3876 1 50395330 50399177 Mtr5g0106 5 995668 1000533 PCT