Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3870 ATGGAAAAAACTGCAACCTATTCCAAATCAGATGCTAAAGAAGAGTGTTCTGTTGTTGACTTGAGCCAAATATCTCTTCGACCCATTAGTCTTTCTGATCTTGATGATGTTTTGGTGTGGACTAGTGATGAAAAAGTGGCCAAGTATTGCACTTGGGAGCCTTATACAAACAAAGAAGATTGCATTGACTTCATCCAAAACATAGCAAGCAAATCTCTATGGTTCAGAGCAATTTGCCTTTGCAATCAAGCAATCGGGTGCATCGATTTCTGTTTGTCTTCGGATAGATGCAGGAACAAATCTGCTGAACTTGGCTATGCTATGAGCTCCAAGTATTGGGGCAAAGGGATTGCCACACTTGTTGTCAAACAAGTGGTTGAAGCTGCATTTAAGGAGTTTCCATACTTGGAAAGGCTTGAAGCTCAAGTTGATGTGGAAAATATGGCTTCTCAGAGAGTATTGGAGAAGGCTGGTTTTCAAAGGGAGGGTGTTCTCAGAAAATATCTGTTCAGCAAGGGAAAAAGTAGAGATATGGTTATGTTCAGTATTCTCTCAGGTGAAGTTCAAATTTGA 573 0.4031 MEKTATYSKSDAKEECSVVDLSQISLRPISLSDLDDVLVWTSDEKVAKYCTWEPYTNKEDCIDFIQNIASKSLWFRAICLCNQAIGCIDFCLSSDRCRNKSAELGYAMSSKYWGKGIATLVVKQVVEAAFKEFPYLERLEAQVDVENMASQRVLEKAGFQREGVLRKYLFSKGKSRDMVMFSILSGEVQI* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3870 190 Gene3D - 20 189 - -
Mtr1g3870 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 184 IPR016181 -
Mtr1g3870 190 Pfam Acetyltransferase (GNAT) domain 25 160 IPR000182 GO:0016407
Mtr1g3870 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 177 IPR000182 GO:0016407
Mtr1g3870 190 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 15 187 - -
Mtr1g3870 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 15 187 - -
Mtr1g3870 190 CDD NAT_SF 77 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3870 Mtr-Chr1 50309699 50311068 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr1g3870 Acetyltransf_3 2.8e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3870 - - gmx:111043201 264.233