Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3861 ATGAACGGCGGAAGCACCGTTTCCTTCCGATCCATCCTCGACAGACCTCTTAACCAACTCACTGAAGATGACATTTCTCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCACAGGCGATCCAGCAGGTGATTTCTCTCAAAGCGCTTCTAGAACCTACCGACGATGATATCCCGGCTACCGTCGGCGTTGGTGTCTCCTCCGCCATTCACCACCATCACCACCACCACCCTCCTCAACCTCCGCCGAAGGCTTTGGATCCCGAAGATACTGCTTTGGAACTACAGAAATCCACTTCACCTGTTGCTGAGAGACCCACGGAAACCAATGATGCCAATGTTGTTAACAATCCCGGAGGGTGCGCACCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCGCCGGATAAGGCACGATCAATCATGCAGCTTGCTGCTGCATGTCCGTCCTCCTTTCCTCAGGATAATCCTTCAAATAAAAATGCAGCAGTTTGGGCTTCTCCTTGCAACTTACCTATTGATAAGGAAGTCCTCTTCCCTACTGACACAGCAATCCTTCAAGTTGCTCAAACAGATAAGATGGTGGAATACCCTCTGCAATACAGGGAGAAAGGAAGCACAGCTCGTGATGCTGAGGGTCAGGCAAGCAGAAAAGTGTCACTGCAGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGATCGAAGGGCAAGAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGTGAAGCTCCATGCCTCAAATGGGAATTCAAGTCGTAGTAGCACTGACTCTCCACCACAGCCTAGACTGCCTTTAGTTTCCAGTGGCTCAGCTGAAAACCAGCCAAAAGTTACCCTTCCCATTGATTTGAATGATAAAGATGTTCAAGAATGCTAA 987 0.4813 MNGGSTVSFRSILDRPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDIPATVGVGVSSAIHHHHHHHPPQPPPKALDPEDTALELQKSTSPVAERPTETNDANVVNNPGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKARSIMQLAAACPSSFPQDNPSNKNAAVWASPCNLPIDKEVLFPTDTAILQVAQTDKMVEYPLQYREKGSTARDAEGQASRKVSLQRYLEKRKDRGRSKGKKLTGITSSNFEMYLNLPVKLHASNGNSSRSSTDSPPQPRLPLVSSGSAENQPKVTLPIDLNDKDVQEC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3861 328 MobiDBLite consensus disorder prediction 281 314 - -
Mtr1g3861 328 MobiDBLite consensus disorder prediction 281 328 - -
Mtr1g3861 328 Pfam Jas motif 237 254 IPR018467 -
Mtr1g3861 328 ProSiteProfiles Tify domain profile. 135 170 IPR010399 -
Mtr1g3861 328 MobiDBLite consensus disorder prediction 81 100 - -
Mtr1g3861 328 SMART tify_2 135 170 IPR010399 -
Mtr1g3861 328 MobiDBLite consensus disorder prediction 107 129 - -
Mtr1g3861 328 PANTHER PROTEIN TIFY 4A-RELATED 8 312 - -
Mtr1g3861 328 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 312 IPR040390 -
Mtr1g3861 328 MobiDBLite consensus disorder prediction 227 263 - -
Mtr1g3861 328 Pfam tify domain 141 169 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3861 Mtr-Chr1 50168977 50175589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3861 1 283 Tify Gene Family AT4G14720 43.322 6.82e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr1g3861 tify 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3861 - - gmx:100808970 451.825