Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr1g3837 | ATGGAAGACGAAGGCTTAATGCCTTTGTTCTATGCTAGGCAGAAAAAATGGTGGTTCCATGCGACAACAATGTTTCTCATGCTGTTGCTTCTTTCTCCATTTGCATTTTCACTTCAGGAAGAAGGACAAGCATTAATGGCAATGAAGTCTTCCTTCAACAACATAGCTGACGTTCTCCTTGACTGGGATGATGTACACAATGATGACTTTTGCTCATGGCGTGGAGTTTTCTGTGATAACGCCAGTCATGCTCTTACTGTTGTATCTCTGAATTTGTCAAGCTTGAACCTTGGTGGTGAGATATCACCAGCAATTGGTGATTTAAGAAACTTGCAATCCATAGATTTGCAAGGGAATAAACTAACTGGTCAAATCCCAGATGAAATTGGGAACTGTGGTGCACTTTTTCACCTGGATTTATCTGATAATCAACTTTATGGTGATATACCTTTCTCCATATCAAAGCTGAAGCAACTTGAGTTTTTGAACTTAAAGAACAATCAGTTGACTGGTCCTATTCCTTCCACGTTATCCCAAATTCCAAACCTTAAGACTCTTGATCTTGCTCGAAATAAGCTCATAGGAGAGATACCAAGGCTACTCTATTGGAATGAAGTATTGCAATACCTTGGATTGCGAGGGAATATGTTGACTGGAATTTTGTCTCCGGATATTTGCCAATTATCTGGTTTGTGGTACTTTGATGTCAGAGGCAATAATTTGACTGGTCCTATTCCAGAAAGCATTGGCAACTGTACAAGTTTTGAAATCTTTGACATATCATACAATCAGATTACTGGGGAGATTCCTTATAACATTGGATTTCTTCAAGTTGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGGAAGATACCAGAAGTGATTGGTTTGATGCAAGCTCTTGCAATTTTGGATTTGAGTGAGAATCAGTTAGTGGGACCAATTCCTCCTATACTAGGAAATCTGTCTTTCACTGGCAAGCTGTACCTTCACGGAAACATACTTACTGGTTCAATACCTCCCGAGCTTGGCAATATGTCTAAACTGAGCTACTTGCAATTGAATGGTAATCAACTGGTGGGTGAAATTCCGAAGGAGTTTGGGAAGCTTGAAAATCTGTTTGAATTAAATCTTGCCAATAATCACCTTGAGGGATCTATTCCACATAACATCAGCTCCTGCACAGCCTTAAATCAGTTTAATGTGCATGGTAATCAGTTAAGCGGTTCTATTCCAACGACCTTTCGCAATCTTGAGAGTCTGACTTACTTGAACCTTTCTGCAAATAACTTCAAAGGGAATATACCAGTCGAGTTGGGTCATATCATTAATCTTGATACATTGGACCTATCAAGCAATAATTTTTCTGGACATGTCCCAGCATCTGTTGGTTATCTAGAGCATCTTTTGACCCTGAACTTGAGTCATAACCATCTTGAAGGTCCGTTGTCCGCTGAATTGGGGAATCTCAGAAGCATACAGACTATGGATATGTCTTTCAACAACCTGTCAGGCAGCATTCCTCCAGAAATTGGACAGCTGCAAAACCTTGCATCTCTGACTTTGAACAACAATGATCTGCATGGGAAGATTCCAGAACAGCTCACCAATTGTTTCAGTCTTTCCACTTTGAACTTTTCTTATAACAACTTTTCTGGAGTAGTTCCGTCTTCAAAGAACTTCACGCGGTTCGCAGCTGACAGCTTCATTGGAAATCCTTTATTATGTGGAAATTGGGTAGGATCAATTTGTCGTCCTTATATTCCTAAATCAAAAGAGATATTTTCTAGAGTTGCAGTTATATGTCTCACTCTTGGTATCATCATATTATTGGCTATGATAATTGTCGCAATCTATAGATCCATCCAATCAAAGCAGTTGATGAAAGGATCTGGCAAGATGGGACAAGTGCCTCCTAAACTTGTCATTCTTCACATGGATTTGGCAATACACACTTTGGATGATATAATAAGAAGCACTGAGAATCTTAGTGAGAAATTTATCATAGGGTATGGTGCCTCTAGTACTGTGTACAAGTGTGTGTTGAAAAATTCCCGACCGATTGCAGTCAAGCGATTGTACAATCAGCATCCTCACAATTTAAGAGAATTTGAAACGGAGCTTGAAACAATTGGCAGCATTAGACATAGAAATCTTGTCACATTGCATGGCTATGCACTTACTCCTTTTGGAAATCTCCTTTTTTATGAGTACATGGCAAATGGCTCGCTCTGGGATCTTCTACATGGTCCACTGAAGGTAAAACTTGATTGGGAAACACGGATGAGGATTGCTGTTGGAGCTGCTGAAGGACTTGCTTATCTTCACCATGACTGCAACCCCCGAATAGTTCATAGGGACATCAAGTCTTCAAATATTTTGCTTGATGAGAACTTTGAGGCTCACCTCTCTGATTTTGGCACTGCAAAAAGCATCCCAGCCACAAAAACTCATGCCTCAACTTATGTTCTTGGAACTATAGGCTACATCGATCCTGAATATGCACGGACGTCTAGGCTGAATGAAAAATCAGATGTTTATAGCTTTGGCATTGTTTTGCTAGAGCTACTTACTGGGAAGAAGGCAGTGGACAACGATTCCAACTTGCACCAATTGATATTGTCCAAGGCGGATAGTAACACTGTAATGGAGGCTGTGGATCCAGAGGTATCCGTTACCTGTATTGATTTGGCTCATGTCAAGAAGACCTTTCAACTTGCTCTGCTTTGCACAAGAAGGAACCCTTCTGAGAGGCCTAGCATGCATGAAGTAGCCAGGGTGCTTATTTCTCTACTTCCTCCACCTCCAAGTAAAGTTGTTGCAGCTGCTGCCAAGAGTTTTGACTATGCACCTTTTGTTGCCGAGAAGGGACAGCACCACAGAAAATTGGATGGACTACAACCTCAGCAGGATAACAACTTGTCTAATGCTCAATGGTTTGTTCGTTTTGGGGATGTCATATCCAAGAGCTCTCTTTGA | 2982 | 0.4068 | MEDEGLMPLFYARQKKWWFHATTMFLMLLLLSPFAFSLQEEGQALMAMKSSFNNIADVLLDWDDVHNDDFCSWRGVFCDNASHALTVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCGALFHLDLSDNQLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLSQIPNLKTLDLARNKLIGEIPRLLYWNEVLQYLGLRGNMLTGILSPDICQLSGLWYFDVRGNNLTGPIPESIGNCTSFEIFDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENQLVGPIPPILGNLSFTGKLYLHGNILTGSIPPELGNMSKLSYLQLNGNQLVGEIPKEFGKLENLFELNLANNHLEGSIPHNISSCTALNQFNVHGNQLSGSIPTTFRNLESLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNHLEGPLSAELGNLRSIQTMDMSFNNLSGSIPPEIGQLQNLASLTLNNNDLHGKIPEQLTNCFSLSTLNFSYNNFSGVVPSSKNFTRFAADSFIGNPLLCGNWVGSICRPYIPKSKEIFSRVAVICLTLGIIILLAMIIVAIYRSIQSKQLMKGSGKMGQVPPKLVILHMDLAIHTLDDIIRSTENLSEKFIIGYGASSTVYKCVLKNSRPIAVKRLYNQHPHNLREFETELETIGSIRHRNLVTLHGYALTPFGNLLFYEYMANGSLWDLLHGPLKVKLDWETRMRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKSIPATKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADSNTVMEAVDPEVSVTCIDLAHVKKTFQLALLCTRRNPSERPSMHEVARVLISLLPPPPSKVVAAAAKSFDYAPFVAEKGQHHRKLDGLQPQQDNNLSNAQWFVRFGDVISKSSL* | 994 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr1g3837 | 993 | SUPERFAMILY | L domain-like | 39 | 338 | - | - | |
| Mtr1g3837 | 993 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 784 | 796 | IPR008271 | GO:0004672|GO:0006468 | |
| Mtr1g3837 | 993 | Pfam | Leucine Rich Repeat | 110 | 132 | IPR001611 | GO:0005515 | |
| Mtr1g3837 | 993 | SMART | serkin_6 | 664 | 930 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mtr1g3837 | 993 | SUPERFAMILY | RNI-like | 222 | 557 | - | - | |
| Mtr1g3837 | 993 | Pfam | Leucine rich repeat N-terminal domain | 39 | 79 | IPR013210 | - | |
| Mtr1g3837 | 993 | ProSiteProfiles | Leucine-rich repeat profile. | 182 | 204 | IPR001611 | GO:0005515 | |
| Mtr1g3837 | 993 | SUPERFAMILY | Protein kinase-like (PK-like) | 646 | 929 | IPR011009 | - | |
| Mtr1g3837 | 993 | Gene3D | Ribonuclease Inhibitor | 461 | 587 | IPR032675 | - | |
| Mtr1g3837 | 993 | Gene3D | Ribonuclease Inhibitor | 38 | 205 | IPR032675 | - | |
| Mtr1g3837 | 993 | Gene3D | Ribonuclease Inhibitor | 278 | 363 | IPR032675 | - | |
| Mtr1g3837 | 993 | Gene3D | Phosphorylase Kinase; domain 1 | 632 | 739 | - | - | |
| Mtr1g3837 | 993 | Pfam | Protein kinase domain | 668 | 926 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mtr1g3837 | 993 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED | 29 | 961 | - | - | |
| Mtr1g3837 | 993 | ProSiteProfiles | Protein kinase domain profile. | 664 | 933 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mtr1g3837 | 993 | Gene3D | Ribonuclease Inhibitor | 364 | 460 | IPR032675 | - | |
| Mtr1g3837 | 993 | Pfam | Leucine rich repeat | 328 | 384 | IPR001611 | GO:0005515 | |
| Mtr1g3837 | 993 | Pfam | Leucine rich repeat | 445 | 504 | IPR001611 | GO:0005515 | |
| Mtr1g3837 | 993 | ProSitePatterns | Protein kinases ATP-binding region signature. | 670 | 692 | IPR017441 | GO:0005524 | |
| Mtr1g3837 | 993 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 29 | 961 | - | - | |
| Mtr1g3837 | 993 | Pfam | Leucine Rich repeats (2 copies) | 157 | 198 | IPR025875 | - | |
| Mtr1g3837 | 993 | Gene3D | Ribonuclease Inhibitor | 206 | 277 | IPR032675 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 108 | 132 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 467 | 491 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 228 | 252 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 347 | 370 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 299 | 323 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 515 | 539 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 419 | 443 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 371 | 395 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 156 | 179 | IPR003591 | - | |
| Mtr1g3837 | 993 | SMART | LRR_typ_2 | 180 | 204 | IPR003591 | - | |
| Mtr1g3837 | 993 | Gene3D | Transferase(Phosphotransferase) domain 1 | 740 | 935 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr1g3837 | Mtr-Chr1 | 49946545 | 49954896 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr1g3837 | 110 | 993 | Receptor kinase-like Gene Family | AT5G07180 | 76.384 | 0.0 | 1359 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_LRR-XIIIb | Mtr1g3837 | Pkinase | 4.4e-43 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr1g3837 | K20718 | - | gmx:100811653 | 1666.36 |
Event-related genes