Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3828 ATGTCCACGTCATCACCACCACCGCTTCAACTAAACAACAACCACACCACCACCGTCATCCCCGGTTGCTCTTTCATCCTCGCACTTCTCCACTGCCTCCGCAACAAAAAACGAACCACTCCCTCCTCCGACTCCGACTCTAACCCTCCTCACCCTTTCTCCTACTCCCTCCTACTCCGCGCCACAAACTCCTTCTCCACAATCCTCGGTCACGGTGGCTTCGGTCCTGTCTACTCCGGCACTCTCCCTTCCTCCGGTAAACCCATCGCCGTCAAACTCATGAACTCCACCTCCCTCGGCGTCGTCGGCAGCCAAGGAGAACGCGAGTATCACAACGAACTCTTCTTCGCTTCCAGACTCCAATCCGAACACCTTGTACCTGCTATCGGTTTCTCCTCTGATCCTAAACGCCGTCGTTTTGTTCTCGTTTATGATCTCATGAAAAACGGTAACCTCCACGACGCTCTTTTTCGTCGTAAAAGCCTTGAATTAACGATATGGAAGACGCGTTTTTCGATAATTGTTGATATAGCAAAAGGAATTCAGTATCTTCATTCATGTGATCCTGCAATAATTCATGGTGATATTAAACCTAGTAATATTCTCCTTGATCATTCGTTTTCAGCTAAAATCGCAGATTTCGGACTTGCTAGGTTAAAAACCTTTCAATTCGAAATCAGTGATTATAGAAGAAAAGAAGAGTTTGAGAGTGATGGTGCTGAAACAGAGAGTGTTAATACTAGCTTTGAGGAATATGAGAGGGAGATGGTTGGTGGTGGATTGAAGAAGAGTGGAAGTGTGAAGGATTATGTGATGGATTGGATTGGAAAAGAGGTGAAGGAAGAAAGAACAAAGAATGATGATTTGGTGGGTGGAAGTGGAAAGGGAGAGAAAAGTAAGATGAAGAAGAAATTGGAGTGGTGGGAATCAATGGATGAAGGAAAGAGAAAGGGTGATTTGAAAAAAGAGAAGAGAAGACCAGTAAGAGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTTGAAAACAAGAACAAGAAGAAGAATAATAAGAAAAAGAGTGAAAAAAATGGTGATAATTGGTGGAAATGGGACAGAGATCATGTTCATGATCATGATGCTGGTAGTGATGTGAAGAAAATGAGTTATAAAAACCGTAGTAGGAAGGAACGAGGTAGTGGTGATTCATGGTTAAGTGGGGAATTAAGGAGAGTGAGTTGGAATAGTTATGATTCATGTAATAGTGGAGAAATTCATAAGAGTGGTGAAATTAGTAGTACTCCAAGTATGAGAGGAACTGTTTTTTATGTTGCTCCTGAAAATGGTTATAGTGATGTAACAGAGAAGTCTGATGTTTATAGTTTTGGTGTGTTATTACTTGTTATTGTTTCTGGGAGAAGACCTCTTCAAGTGAATGCCGGTGGTAGTGGGGATGGGGATGGATTCAAGCATATTTCAGAGTTTAAGCGAGCGAATTTGGTTTCTTGGGCTAGACATTGTGCGCGTAATGGGAAACTACTCGAACTTGTTGATCCATTAGTTGAGTTGTTGCTATTGGATGATAAAGAGCAGGCTCTTTTATGTATCAAAATTACATTGCTTTGTTTGCTTAAGTCGCCTAATCGGAGACCTTCAATGAAAGAGATTGTAGGAATGCTTAGCGGGGAATTGGAGCCACCTCAATTGCCACCTGAGTACTCACAATCTCGATTCCAATTCAAGAATCGAAAAGAATGTTCATGA 1740 0.4236 MSTSSPPPLQLNNNHTTTVIPGCSFILALLHCLRNKKRTTPSSDSDSNPPHPFSYSLLLRATNSFSTILGHGGFGPVYSGTLPSSGKPIAVKLMNSTSLGVVGSQGEREYHNELFFASRLQSEHLVPAIGFSSDPKRRRFVLVYDLMKNGNLHDALFRRKSLELTIWKTRFSIIVDIAKGIQYLHSCDPAIIHGDIKPSNILLDHSFSAKIADFGLARLKTFQFEISDYRRKEEFESDGAETESVNTSFEEYEREMVGGGLKKSGSVKDYVMDWIGKEVKEERTKNDDLVGGSGKGEKSKMKKKLEWWESMDEGKRKGDLKKEKRRPVREWWKEEYSQELENKNKKKNNKKKSEKNGDNWWKWDRDHVHDHDAGSDVKKMSYKNRSRKERGSGDSWLSGELRRVSWNSYDSCNSGEIHKSGEISSTPSMRGTVFYVAPENGYSDVTEKSDVYSFGVLLLVIVSGRRPLQVNAGGSGDGDGFKHISEFKRANLVSWARHCARNGKLLELVDPLVELLLLDDKEQALLCIKITLLCLLKSPNRRPSMKEIVGMLSGELEPPQLPPEYSQSRFQFKNRKECS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3828 579 Coils Coil 333 357 - -
Mtr1g3828 579 Gene3D Transferase(Phosphotransferase) domain 1 54 245 - -
Mtr1g3828 579 SUPERFAMILY Protein kinase-like (PK-like) 47 566 IPR011009 -
Mtr1g3828 579 MobiDBLite consensus disorder prediction 555 579 - -
Mtr1g3828 579 ProSiteProfiles Protein kinase domain profile. 63 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3828 579 Pfam Protein kinase domain 67 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3828 579 MobiDBLite consensus disorder prediction 339 395 - -
Mtr1g3828 579 Gene3D Transferase(Phosphotransferase) domain 1 408 560 - -
Mtr1g3828 579 PANTHER OS07G0586332 PROTEIN 1 579 IPR044576 -
Mtr1g3828 579 SMART serkin_6 63 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3828 579 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 579 - -
Mtr1g3828 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3828 Mtr-Chr1 49867522 49869811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3828 415 559 Receptor kinase-like Gene Family AT2G43700 28.767 3.09e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mtr1g3828 Pkinase 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3828 - - aprc:113872924 630.172