Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3827 ATGGCTAAGTATCAAATCACTCTAATTGAAAAAATGAGTTGCATTTTAACAACCTGTTTCCTCTTGAGTATAGTCTTATCTACACATGCTGAATTTGTCAAAAAAACTTACATCATTCATATGGATCAATCAGCAAAACCAGACATCTTTTCCAGCCACCAAGAGTGGTATTCATCAAAAGTGAAATCAGTACTGTCTAAATCAGTAGAAGCTGAAATAGATAGCAGTGAAGAAGAGAGAATCATTTACAGTTACAACACTGCTTTTCATGGAATGGCTGCTAAATTAAGCACAGAAGAAGCTAAAAAGCTAGAATCTGAAGCTGGTGTTGTAGCCATATTCCCTGATACAAAGTACCAACTACACACAACAAGAAGTCCATATTTTCTTGGTCTTGAACCAATTCAAAACACCAACAGAAGCTGGTCAGAAAAACTAGCTAACCATGATGTTATAGTTGGAGTCCTAGACACTGGTATTTGGCCTGAGAGTGAGAGTTTCATTGATACAGGACTGAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGTAGAGGATTCAGAAAACATCATTGCAATAAGAAGATTGTAGGTGCAAGAATATTCTACCATGGATATGAAGCAGCAACAGGTAGGATTGATGAGCAAGCAGATTATAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCCGGATCTCCGGTGCATGGTGCTAATCTTCTTGGTTATGCTTATGGAACAGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCATACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCTGTAGCTGATGGAGTCGATGTTCTATCCATCTCTTTAGGTGGTGGAGTCTCATCTTACTCCCATGATAGTTTATCTGTAGCTTCATTTGGAGCAATGGAAAGGGGTGTTTTTGTTTCATGTTCAGCTGGAAATTCAGGACCCGACCCTGTCAGTCTCACAAATGTTTCGCCATGGATCACCACGGTTGGAGCTAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAATTCTCAGGAGCATCAATCTATAAAGGAAAATCCGTGCTCTCGGTTAGAAAACAATACCCTTTGGTTTACATGGGAAGCAACTCAAGCAGTCCTGATCCAAGATCTTTGTGTTTGGAAGGTACTTTGGATAGTCGAACTGTCACAGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCAAGAGTGCAAAAGGGGCAGGTAGTGAAAAATGCAGGAGGTGTAGGAATGATTCTCACAAACACTGCAGCAAATGGAGAAGAATTAGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAGTAGGAGAAAAAGAAGGCAAAGATATCAAACAATATGTGTTAACAACTAAAAAAGCTACAGCTACATTAGCTTTTCATAACACAAGATTAGGAATTAGACCATCTCCTATAGTAGCAGCATTTTCATCAAGAGGGCCAAGTTTACTCACACTTGAAATTCTAAAACCTGATATAGTAGCACCTGGTGTGAACATTCTTGCTGCTTGGAGTGGACTTACTGGTCCATCAAGTTTACCAATAGATCATAGAAGGGTTAAGTTTAACATACTCTCCGGAACTTCGATGTCATGTCCTCATGTAAGTGGAATCGCGGCTATGATCAAAGCTAAACATCCTGAATGGAGTCCAGCTGCTATAAAATCAGCAATCATGACAACAGCTTATGTTCATGATAATACTATTAAACCTCTTAGAGATGCTTCTTCTGCTGAATTTTCAACTCCTTATGATCATGGTGCTGGCCATATTAATCCTAGAAAAGCTCTTGATCCAGGTTTATTATATGATATCGAACCTCAAGATTACTTTGAGTTTCTTTGCACAAAGAAACTAAGCCCTTCAGAATTAGTAGTTTTTTCTAAAAATTCAAACAGAAATTGCAAACACACTCTTGCTAGTGCTAGTGACTTGAACTATCCTGCTATATCAGTTGTGATTCCAGCAAAACCAACCAATTTTGCTTCAACGATTCACCGAACTGTTACCAATGTTGGTCCTGCTGTTTCCAAATATCATGTCATTGTTACACCATTTAAAGGCGCTGTTGTTAAAGTTGAGCCAGATACATTGAATTTTACAAGAAAATATCAGAAACTATCTTACAAGATCAGTTTCAAAGTGACATCTAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATAGGTTGCATAAAGTAAGAAGTCCGATTGTGATAACATATATGCCACCAATGTGA 2349 0.3917 MAKYQITLIEKMSCILTTCFLLSIVLSTHAEFVKKTYIIHMDQSAKPDIFSSHQEWYSSKVKSVLSKSVEAEIDSSEEERIIYSYNTAFHGMAAKLSTEEAKKLESEAGVVAIFPDTKYQLHTTRSPYFLGLEPIQNTNRSWSEKLANHDVIVGVLDTGIWPESESFIDTGLKPVPSHWKGACETGRGFRKHHCNKKIVGARIFYHGYEAATGRIDEQADYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVDVLSISLGGGVSSYSHDSLSVASFGAMERGVFVSCSAGNSGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKFSGASIYKGKSVLSVRKQYPLVYMGSNSSSPDPRSLCLEGTLDSRTVTGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAVGEKEGKDIKQYVLTTKKATATLAFHNTRLGIRPSPIVAAFSSRGPSLLTLEILKPDIVAPGVNILAAWSGLTGPSSLPIDHRRVKFNILSGTSMSCPHVSGIAAMIKAKHPEWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALDPGLLYDIEPQDYFEFLCTKKLSPSELVVFSKNSNRNCKHTLASASDLNYPAISVVIPAKPTNFASTIHRTVTNVGPAVSKYHVIVTPFKGAVVKVEPDTLNFTRKYQKLSYKISFKVTSRQSEPEFGGLVWKDRLHKVRSPIVITYMPPM* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3827 782 Gene3D - 648 779 - -
Mtr1g3827 782 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Mtr1g3827 782 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Mtr1g3827 782 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Mtr1g3827 782 CDD Peptidases_S8_3 119 597 IPR034197 -
Mtr1g3827 782 ProSiteProfiles Serine proteases, subtilase domain profile. 129 631 - -
Mtr1g3827 782 CDD PA_subtilisin_like 362 492 - -
Mtr1g3827 782 Pfam PA domain 388 478 IPR003137 -
Mtr1g3827 782 Pfam Peptidase inhibitor I9 36 122 IPR010259 -
Mtr1g3827 782 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 27 778 - -
Mtr1g3827 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 122 IPR037045 -
Mtr1g3827 782 Pfam Fibronectin type-III domain 678 776 IPR041469 -
Mtr1g3827 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Mtr1g3827 782 Gene3D Peptidase S8/S53 domain 150 644 IPR036852 GO:0004252|GO:0006508
Mtr1g3827 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 778 IPR045051 -
Mtr1g3827 782 Pfam Subtilase family 150 601 IPR000209 GO:0006508|GO:0008236
Mtr1g3827 782 Gene3D - 356 499 - -
Mtr1g3827 782 SUPERFAMILY Subtilisin-like 121 635 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3827 Mtr-Chr1 49858419 49861640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3827 21 782 Subtilisin-like Serine Gene Family AT5G51750 69.509 0.0 1114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3827 - - gmx:102661592 1296.18