Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3821 ATGCCCTTGAAATGTTTATGTTGTTTTCTCTCTAATGAAGAGCAAAGCCATAAACGGAATGTTGATGACAAGAAAAATATTAGGGACTATCCATGGGAAAGATACACCTTGAAAGAGTTGCTTCGTGCAACAAACAACTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGAAGTGTATATTGGGGTCAAACAAGTAAAGGCGTCGAGATTGCTGTGAAGCGGTTGAAGACAATGACTGCAAAAGCAGAGATGGAATTTGCAGTTGAAGTGGAAGTACTAGGAAGGGTGAGGCATAAGAATTTGTTAGGATTGAGGGGGTTCTATGCAGGAGGAGATGAAAGGTTAATTGTGTATGATTACATGTCTAATCATAGCTTGCTCACTCATTTACATGGTCAACTTGCTTCAGATTGTTTACTTGATTGGCCTAGAAGAATGAGCATAACAGTTGGTGCAGCTGAAGGTTTAGCGTACTTGCACCATGAGGCAAATCCTCACATAATTCATAGAGACATAAAGGCAAGCAATGTTCTATTAGACACAGAATTTCAAGCCAAGGTAGCTGATTTTGGTTTTGCAAAGCTAATACCAGCAGGTGTAAGCCATCTTACAACAAGGGTTAAAGGCACACTTGGTTATTTGGCACCAGAATATGCTATGTGGGGTAAGGTTTCTGAGAGTTGTGATGTTTATAGCTTTGGAATTTTGCTTTTGGAGATTATAAGTGCCAAGAAACCAATTGAAAAACTACCTGGTGGAATAAAAAGGGACATTGTTCAATGGGTCACACCATATGTACAAAAGGGTGTTTTTAAACATATTGCTGATCCAAAATTGAAAGGGAATTTTGATTTAGAGCAATTGAAATCTGTGATTATGATAGCTGTGAGGTGCACTGATAGTAGTCCTGATAAAAGGCCTAGCATGATAGAGGTGGTGGAATGGCTTAAGGATGGTGTTTCAAAGAGAAAAAAAGAGATTCCAAATTTGAGTAACAATAAGGGACATGATGAAGAAAATGATGAAAACTATGAAGAGTTTGTAACAATGCAGTCCAACAATTTGAAAATACTAAGTGACAATGATAGGCGCAAAATGAGATGA 1110 0.3802 MPLKCLCCFLSNEEQSHKRNVDDKKNIRDYPWERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVSKRKKEIPNLSNNKGHDEENDENYEEFVTMQSNNLKILSDNDRRKMR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3821 369 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mtr1g3821 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Mtr1g3821 369 Pfam Protein kinase domain 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3821 369 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Mtr1g3821 369 Gene3D Phosphorylase Kinase; domain 1 9 122 - -
Mtr1g3821 369 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 343 - -
Mtr1g3821 369 PANTHER OS01G0253100 PROTEIN 4 343 IPR045271 GO:0004714|GO:0006468
Mtr1g3821 369 ProSiteProfiles Protein kinase domain profile. 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3821 369 SUPERFAMILY Protein kinase-like (PK-like) 31 329 IPR011009 -
Mtr1g3821 369 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3821 Mtr-Chr1 49790893 49793119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3821 17 342 Receptor kinase-like Gene Family AT5G45780 41.124 3.76e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mtr1g3821 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3821 - - gmx:100817283 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3821 1 49790893 49793119 Mtr1g3821 1 49790893 49793119 ECH