Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3820 ATGTCTATGTCACTACACATTACTGCTATTGCTATTCTTTCCTTGCATCTCCTCCTCTTACTTGCGAATGTAAACTCATCATCCTCCATGGATCCATACAAAGTACTCAACCTAATCCACAACCCAAACGGCACCATCACACGCTTAGACAAATACCCACAATCCCCACCTTCACAAGATCCCAATCTTCCTACACCCTCCCTCTCCAAAGACCTGACCCTAAACCCATCAAAACACACTTGGGCTAGAATCTACTTACCCCACAAACCAACCTCCAAGAAACTACCACTCATCGTTTTCTACCATGGCGGTGGCTTCATCTTTTACAGCGCCGCTTCAACTTACTTCCACAACTTCTGCTCCAACCTCGCTAATCAAACTCACTCCGTCGTTGTTTCACTCGAATATCGTCTTGCACCGGAACACCGTCTTCCGGCAGCCTATGAAGACTCCGTGGAGATTCTTCACTGGATCAAAACCTCAAAAGATCCATGGCTAACACATCATGCTGATTACTCACGTGTTTATCTCATGGGAGAGAGTGCTGGAGGTAACATTGCATACACCGCAGGTCTACGTGCAGCTGCAATAGTTGATGAGATTAAACCGGTTAATATCAAAGGTTTGATATTAATTCAACCGTTTTTTGGTGGGAACAAGAGGACAGCGTCTGAGATAAGACTTGAGAAGGATTTGAATTTACCGTTGATAGTTACTGATTCAATGTGGAATTTGTCTTTACCTTTAGGAGTTGATCGTGATTATGAGTATTGTAATCCAACGGTGAATGGTGGAGATAAGGTTTTGGAGAAGATAAGGTTGTTTGGTTGGAGAGTAGCGGTTTTTGGTTGTGATGGGGATCAACTTGTGGATCGTCAGAGGGAATTGGTGAAGTTGCTTGAGGGTAAAAGTGTCAATGTGGTTGGACAGTTTTATAGTGGTGGTAGACATGGTATTTTTGTCGGTGATGCTTCTATGTCTCAAAAGGTTTTCGATTTAGTGAACGGTCTTCATTGA 1017 0.4336 MSMSLHITAIAILSLHLLLLLANVNSSSSMDPYKVLNLIHNPNGTITRLDKYPQSPPSQDPNLPTPSLSKDLTLNPSKHTWARIYLPHKPTSKKLPLIVFYHGGGFIFYSAASTYFHNFCSNLANQTHSVVVSLEYRLAPEHRLPAAYEDSVEILHWIKTSKDPWLTHHADYSRVYLMGESAGGNIAYTAGLRAAAIVDEIKPVNIKGLILIQPFFGGNKRTASEIRLEKDLNLPLIVTDSMWNLSLPLGVDRDYEYCNPTVNGGDKVLEKIRLFGWRVAVFGCDGDQLVDRQRELVKLLEGKSVNVVGQFYSGGRHGIFVGDASMSQKVFDLVNGLH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3820 338 Gene3D alpha/beta hydrolase 33 336 IPR029058 -
Mtr1g3820 338 MobiDBLite consensus disorder prediction 47 70 - -
Mtr1g3820 338 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 27 334 - -
Mtr1g3820 338 SUPERFAMILY alpha/beta-Hydrolases 43 323 IPR029058 -
Mtr1g3820 338 Pfam alpha/beta hydrolase fold 98 320 IPR013094 GO:0016787
Mtr1g3820 338 PANTHER ARYLACETAMIDE DEACETYLASE 27 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3820 Mtr-Chr1 49785639 49787024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3820 43 338 Carbohydrate Esterase AT5G16080 35.161 6.62e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3820 - - gmx:100777262 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3820 1 49785639 49787024 Mtr1g3820 1 49785639 49787024 ECH
Mtr6g1580 6 28373182 28374414 Mtr1g3820 1 49785639 49787024 PCT
Mtr1g3820 1 49785639 49787024 Mtr6g1581 6 28439249 28440476 PCT