Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3810 ATGGGCAAGGATTGGTATTGGACTGGAAGAAGAAGATCCTCCAAGAAAACAGAAGCTGCTGAAACAGATATCCCTTCTGGTTGCATGTGTGCTGTTTTTCAAGCCTTTGATTTTCATCCCTTTCAACTTCCCATTAACCAACAACAATCCTCTTTCAACTCTTCTTCTCCCATACACTCTCTCCCCAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATGTGAAGATGGTACATTCTCATCCATCTCAAAACAAGATAGTTTCAAAATCCCAAAGAACATAAGAATCAAAACTAAAGGAGGAAGTTTCAGTGATCTTTCCAATGATCTTTGCTCTCCAGGGACAAAGACACCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCAAACTCCCCTTCTTCCTCATCTTCTTCATCTTTCTCCACTCCAAAAAGACAAAGCCATTACCAAAATAGACCAAAGCAAGACATCAAAATAATGAAACACAGACACAGCACAGATAGTGTCATCAAAACTCCAACATTGTCCTCAGAAAGAACATCATATGTTGAGCATAGACTATCACTCCAAATCAACAAAGAGAACATGAATCTTGGTGAAGATTTGGAAACTCCTAGGTCTTCATTTTCAAAAAGGAAATTTTTTGATGAGAATAATTGCAGAAGTCCAAGTCATTATGCAAGGCAAATTGTTAAACAGGTTAAAGAGAGTATGAGTAGAAAAGTTGGTATGGACATCACCAACACAGTGAAAAACAGAGAACAAGAAAAAGTGAAAGAAGATTTTGTTGCTCAAATCAAATTCAAGAAAGCTCTTAAACCATTAGATGAATCAAATCAAGGAAAAGTACCCTCAACAAACACATCTCATTCCCCAAGACTCAGCAGATTCAATGATAACAACCATAAACATTCACCAACAACTACTCCAAGAGACCAAAATACACATCAAGTACTAAAACAATCATCACCACCACCTGCAGTCAACATTGAAGCACAAGTTTCAAGAGTTTCAACAAAGCCACAAACACAAGCAATGTCAGAGAAGGAGGACAAAAAATCTTTCCCAAAATGCAAGAAAACAGCACATGGGAATTTGAGTCCACGGATAAACAGAAACAAGCCTCCTCAGAAATCATCATCAATCAGAAACAAGCAAGAAGAATCATTCATAACCACTAGAGCTAGTGATATCAAAACCAATAGCAAGAGAACTCATCCAATTTCTAACAACAATGTCCCAAATCTTCTCCATCTCAAAACACACCTTTCTCTTCCAGCTCAAAAACAGGTCAATGATGATGTCCAAGAAGCAAAAAACATGTCACAGTTATTTAGTACTTCGTGCCACAAGTACACACTCGCCACCCGAGGAACCACCAACGATGAATCAAAATCCAACGGTTCCTCCGCCGCTGGAGCTGAGAATGAAGGATCAGAATATCAATACATAACAACCATTCTAAGCCGTTCTGGAATACACAGAGCAACAGTAACTAACCTTCAAGATTTTCAATGGTTCTCTTCAACACATCCATTAGACCCATCAATTTTTCACCGTCTTGAGCTATACCCAACAGCTAAAGATAGCAACTTTACGCAGAAAAATGAACTGGGTCCACGTTGTAACCGTAGATTACTATTTGATTTAGTCGATGAAGTGTTGTCGGAAATTCTGATTAGGCCAAAGTGTTATCATGGGTTGTTGTTGGATACAGTGTGGAAAAGAGTTGGAAGTTTCCCACGTGCGAAATGTGAGGTTTTAGAAGACATTGATGGGTTAATAGAGATGAAGGAGGTGATGGATAAGGTTAAGGAAGAAGAAGAAGAAGGTGAAAAGTTGGTGGCAGAAATTGAAGGGAAGGTGTTGGATATGTTGGTGAATGAAACGTTAACAGTTATGGTTGGCGGCACGTGA 1929 0.3909 MGKDWYWTGRRRSSKKTEAAETDIPSGCMCAVFQAFDFHPFQLPINQQQSSFNSSSPIHSLPKGAEAPRNSLECEDGTFSSISKQDSFKIPKNIRIKTKGGSFSDLSNDLCSPGTKTPTLVARLMGLDLLPDANSPSSSSSSSFSTPKRQSHYQNRPKQDIKIMKHRHSTDSVIKTPTLSSERTSYVEHRLSLQINKENMNLGEDLETPRSSFSKRKFFDENNCRSPSHYARQIVKQVKESMSRKVGMDITNTVKNREQEKVKEDFVAQIKFKKALKPLDESNQGKVPSTNTSHSPRLSRFNDNNHKHSPTTTPRDQNTHQVLKQSSPPPAVNIEAQVSRVSTKPQTQAMSEKEDKKSFPKCKKTAHGNLSPRINRNKPPQKSSSIRNKQEESFITTRASDIKTNSKRTHPISNNNVPNLLHLKTHLSLPAQKQVNDDVQEAKNMSQLFSTSCHKYTLATRGTTNDESKSNGSSAAGAENEGSEYQYITTILSRSGIHRATVTNLQDFQWFSSTHPLDPSIFHRLELYPTAKDSNFTQKNELGPRCNRRLLFDLVDEVLSEILIRPKCYHGLLLDTVWKRVGSFPRAKCEVLEDIDGLIEMKEVMDKVKEEEEEGEKLVAEIEGKVLDMLVNETLTVMVGGT* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3810 642 MobiDBLite consensus disorder prediction 370 417 - -
Mtr1g3810 642 PANTHER DUF4378 DOMAIN PROTEIN 1 642 - -
Mtr1g3810 642 MobiDBLite consensus disorder prediction 283 348 - -
Mtr1g3810 642 MobiDBLite consensus disorder prediction 279 417 - -
Mtr1g3810 642 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 642 - -
Mtr1g3810 642 MobiDBLite consensus disorder prediction 131 159 - -
Mtr1g3810 642 MobiDBLite consensus disorder prediction 132 152 - -
Mtr1g3810 642 Pfam Domain of unknown function (DUF4378) 484 633 IPR025486 -
Mtr1g3810 642 MobiDBLite consensus disorder prediction 49 76 - -
Mtr1g3810 642 Pfam DUF761-associated sequence motif 112 135 IPR032795 -
Mtr1g3810 642 Coils Coil 601 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3810 Mtr-Chr1 49652903 49655869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3810 93 636 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.677 1.37e-51 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3810 - - mtr:MTR_1g101910 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3810 1 49652903 49655869 Mtr1g3810 1 49652903 49655869 ECH
Mtr6g1572 6 28040278 28044903 Mtr1g3810 1 49652903 49655869 PCT