Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3805 ATGGAAGTGAACCCTAACGGCGGCGATGTTTTATGTGAAGAAAACAAAACTGACAGTACTGAAGTATCTCCGTCGGAGACGACGGAGCCTGCGGCGGCGTTAATGAAAGAAGAGCTAACGGAAACGGAAAACAACAGCCTTATTCCGGTGCCGGTTCAAACGATGACAGTGGCGGCGGCGAAGAGGTCATCGAAAGACCGTCACACGAAGGTGGAAGGACGTGGTCGGAGAATCAGGATTCCGGCGACATGCGCCGCCAGAATCTTTCAACTGACGAGGGAGCTAGGTCACAAATCCGACGGAGAAACAATCCGGTGGTTGTTAGAACAAGCTGAACCTTCTATCATTGAAGCAACTGGCACCGGAACGGTGCCAGCCATTGCTGTTTCCGTCGGAGGTACGTTAAAGATTCCAACATCATCTCCGGCGAGACCAGACGGTGAAGATGCTCCGGTGAAGAGAAGAAGAAGAGCTTCAAACAGTGAGTTTGTTGACTTGAATGATCAAGTTTCAATGTGTTCGGGATTAGCACCAATTGCTCAAACCGCATACGGTGCCGCCGCCACCTCCAGTGGCGGTGGTAGTGGTGAAAATGGTGGTGGTTTAGTTCCATTATGGCCTGTTGTAAGTAACGGTGTTGGGTCTAATACAACAGGACCATTTTTCATGTTCCCAAATTCAACTCTAATGAATCAGCCACAGTTTTGGGCTATTCCTGCAGCACCATTTTTCAATGTGCAAACAAGACCTATTTCTGATTTTGTTTCTGCTATGCAAATGCCACAAGAACCTTCAAATGCTGCTACTGCTTATGCAAATTCTAATGCTTCATCTACTTTGGCTCCTAGTTTGAGTTCAGCAACTTCAACTAGTTGTTCTGCTACTACTTCTTCATCCTCTGCTACAAATACTCAGATGCTAAGAGATTTTTCTTTGGATATTTTTGATAAGAAAGAGCTGCAGTTTATGGGTTGTTCTTCTGCAAATTTGGAATCATCTCCCTCTTCAAATTGA 1014 0.4596 MEVNPNGGDVLCEENKTDSTEVSPSETTEPAAALMKEELTETENNSLIPVPVQTMTVAAAKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGEDAPVKRRRRASNSEFVDLNDQVSMCSGLAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSNTTGPFFMFPNSTLMNQPQFWAIPAAPFFNVQTRPISDFVSAMQMPQEPSNAATAYANSNASSTLAPSLSSATSTSCSATTSSSSATNTQMLRDFSLDIFDKKELQFMGCSSANLESSPSSN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3805 337 Pfam TCP family transcription factor 63 131 IPR017887 -
Mtr1g3805 337 MobiDBLite consensus disorder prediction 1 30 - -
Mtr1g3805 337 MobiDBLite consensus disorder prediction 147 161 - -
Mtr1g3805 337 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Mtr1g3805 337 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 16 336 - -
Mtr1g3805 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 336 IPR005333 GO:0003700
Mtr1g3805 337 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3805 Mtr-Chr1 49610712 49612319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3805 1 323 TCP Transcription Factor Family AT5G51910 48.060 4.08e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr1g3805 TCP 9.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3805 - - cam:101514016 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3805 1 49610712 49612319 Mtr1g3805 1 49610712 49612319 ECH