Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3800 ATGCGGCCTGTCATACTTGGGCTTGGTGAGGGTAAAAGGCTATCCGGAAAACATAATCCGATATGGTTGTTCCGGTTAATGCCCCAAATGTTGATCCACCTAGGTGGTTCGAAAGCCGAGGATGCTCCTCCTCATATTCCTCATGTTTTACCACCTCCAGTTGTTGTTGTTTGTATCGACCAGCGAGAACATTTTACCACTAAACACAAGTTTCCAACACAGAATGATTTGTTGGAGTGGGTTGGAGAGAAAGCTAGGAAGCTTGGTTTTTCCACTGTTATTGGTAAATCTGATAACGGTGGCAATGGAAGAAGCGCATTTGTTACTTTGATATGTGAAAGGGGAGGTTCATACATCGAGTACAAGAGAAAGATTCGGCGCGAGATAGCTGGTTCGGTTAAATGCGAGTGTTCGTTTCGGCTGAGAGGTTGCTTGTTGACTCCTGGTGAATGGAGCCTCAAAGTTGGTGATGGTAAACACAACCATGACATGACAGATGTGTTGAAAGTTCATAAAACTGTCGGTCGTCTAAACCCAAATGAACGTGTTCACCTTGAAGAGATGGTGGATTCAAACGTTCCTCCGAGGCAAATGCTTACCAACTTAAATAAGAGGAACCGTACCATTTCAACTACTATCAAACACGTTTATAATGCTTCTTATAGGTATAGGCGGTCCATTAGGGGTACGAGGAATGACATGCAACATCTCTTGAAGTCTTTGGTTGATAATGGTTACGTTTATCATTGTAGGAAGTATCCTGATTCTAAGGTTGTCAGTGATGTTTTTTGGGCACATCCAGATTCTATCAAGTTGTTTAACACGTTCTCCACGGTGCTTGTCTTGGATTCAACATACAAGACAAACAAGTATCGTCTTCCATTGCTTGAGTTTGTCGGTAACACCTCTACCATGAAAACATTATCTATTGCTTTTGCCTATATGATGTTTGAGAGACAAGACAATGTTTATTGGGCGCTTGAGTGGTGTCGTGAGATGTTGCACTCCAAAGATCTCTATCCCAAAGTAGTTGTCACTAACCAGGACAATGCTTTGATCAATGTTGTGGAATACTACAACAAACAGAGCTGA 1092 0.4222 MRPVILGLGEGKRLSGKHNPIWLFRLMPQMLIHLGGSKAEDAPPHIPHVLPPPVVVVCIDQREHFTTKHKFPTQNDLLEWVGEKARKLGFSTVIGKSDNGGNGRSAFVTLICERGGSYIEYKRKIRREIAGSVKCECSFRLRGCLLTPGEWSLKVGDGKHNHDMTDVLKVHKTVGRLNPNERVHLEEMVDSNVPPRQMLTNLNKRNRTISTTIKHVYNASYRYRRSIRGTRNDMQHLLKSLVDNGYVYHCRKYPDSKVVSDVFWAHPDSIKLFNTFSTVLVLDSTYKTNKYRLPLLEFVGNTSTMKTLSIAFAYMMFERQDNVYWALEWCREMLHSKDLYPKVVVTNQDNALINVVEYYNKQS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3800 363 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 334 IPR031052 GO:0006355
Mtr1g3800 363 PANTHER FAR1 FAMILY PROTEIN, EXPRESSED 30 334 - -
Mtr1g3800 363 Pfam MULE transposase domain 279 356 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3800 Mtr-Chr1 49555040 49556582 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g3800 MULE 1.9e-12 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3800 - - mtr:MTR_1g099140 456.062